RNA–Protein interactions for RNA: ENST00000483030.1

CSDE1-206, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-206ENST00000483030 LRCH4O75427 683 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 KIAA0754O94854 1291 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 CLDN7O95471 211 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 TRBC1P01850 177 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 FTLP02792 175 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-206ENST00000483030 PDGFAP04085 211 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 CCDC172P0C7W6 258 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 F3P13726 295 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 FERP16591 822 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF30P17039 623 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 TYRP1P17643 537 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 GNLYP22749 145 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 IL1R2P27930 398 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 ARL4AP40617 200 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 SEPHS1P49903 392 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 EPHB1P54762 984 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 EPHA4P54764 986 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 GFERP55789 205 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 SH3BP2P78314 561 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 IHHQ14623 411 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 KIR2DS5Q14953 304 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 SMTNL2Q2TAL5 461 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 BOLA3Q53S33 107 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 FHL5Q5TD97 284 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 LYSMD3Q7Z3D4 306 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 POLNQ7Z5Q5 900 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 RASGRP3Q8IV61 690 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 HSPH1Q92598 858 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 STAMBPL1Q96FJ0 436 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 CALR3Q96L12 384 aaKnown RBP7.3□□□□□ -1.24
CSDE1-206ENST00000483030 C9orf72Q96LT7 481 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 TGM7Q96PF1 710 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 CSPG4P5Q96PW8 444 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 PLEKHG4BQ96PX9 1271 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 OR6C1Q96RD1 312 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 HERPUD2Q9BSE4 406 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 SYT11Q9BT88 431 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 EPB41L1Q9H4G0 881 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 VPS18Q9P253 973 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 PLEKHB1Q9UF11 243 aaPredicted RBP7.3□□□□□ -1.24
CSDE1-206ENST00000483030 VPS4AQ9UN37 437 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 CHKBQ9Y259 395 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 SLC30A1Q9Y6M5 507 aa7.3□□□□□ -1.24
CSDE1-206ENST00000483030 SPTAN1Q13813 2472 aaKnown RBP7.3□□□□□ -1.24
CSDE1-206ENST00000483030 ANKRD36A6QL64 1941 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 OR5K4A6NMS3 321 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 FADS2P1A8MWK0 482 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 GRID2O43424 1007 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 SPAG6O75602 509 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 CREG1O75629 220 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 RFPL1O75677 317 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 RASSF9O75901 435 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 DNAJB5O75953 348 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 NDUFA10O95299 355 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 PRLP01236 227 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 C9P02748 559 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 ANKRD34CP0C6C1 535 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 CCNYL3P0C7X3 344 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 RARAP10276 462 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 SLC2A4P14672 509 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 TCF4P15884 667 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 AMD1P17707 334 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 LEPRP48357 1165 aaKnown RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 PMS2P54278 862 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 CDH6P55285 790 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 UBE2IP63279 158 aaKnown RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 DSC2Q02487 901 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 DPYSL2Q16555 572 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 ZNF648Q5T619 568 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 TXNRD3NBQ6F5E7 133 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 CAPRIN2Q6IMN6 1127 aaKnown RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 PPP1R2P3Q6NXS1 205 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 TMEM26Q6ZUK4 368 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 TEX26Q8N6G2 289 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 ANKRD20A12PQ8NF67 263 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 CPT1CQ8TCG5 803 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 ERGIC2Q96RQ1 377 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 WDR24Q96S15 920 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 TWSG1Q9GZX9 223 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 OSGEPL1Q9H4B0 414 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 FAM83DQ9H4H8 585 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 RMI1Q9H9A7 625 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 ARFGAP3Q9NP61 516 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 NPDC1Q9NQX5 325 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 OGFRQ9NZT2 677 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 SCHIP1Q9P0W5 487 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 ATXN10Q9UBB4 475 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 MYO1AQ9UBC5 1043 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 LIMA1Q9UHB6 759 aaKnown RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 LNPEPQ9UIQ6 1025 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 KCND3Q9UK17 655 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 PADI1Q9ULC6 663 aa7.29□□□□□ -1.24
CSDE1-206ENST00000483030 USP9XQ93008 2570 aaPredicted RBP7.29□□□□□ -1.24
CSDE1-206ENST00000483030 MN1Q10571 1320 aaPredicted RBP7.28□□□□□ -1.24
CSDE1-206ENST00000483030 C1orf232A0A0U1RR37 186 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 LILRA5A6NI73 299 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 LRRC10BA6NIK2 292 aa7.28□□□□□ -1.24
CSDE1-206ENST00000483030 KIF1CO43896 1103 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms