RNA–Protein interactions for RNA: ENST00000479586.5

HMGN1-212, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 841 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-212ENST00000479586 SLC2A4P14672 509 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 ERCC2P18074 760 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 RPL7AP62424 266 aaKnown RBP17.12■□□□□ 0.33
HMGN1-212ENST00000479586 ZNF235Q14590 738 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.12■□□□□ 0.33
HMGN1-212ENST00000479586 FAM199XQ6PEV8 388 aaPredicted RBP17.12■□□□□ 0.33
HMGN1-212ENST00000479586 USP45Q70EL2 814 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 PPP1R3BQ86XI6 285 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 NUDCD1Q96RS6 583 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 RIOK2Q9BVS4 552 aaKnown RBP17.12■□□□□ 0.33
HMGN1-212ENST00000479586 AP4E1Q9UPM8 1137 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 CSMD2Q7Z408 3487 aa17.12■□□□□ 0.33
HMGN1-212ENST00000479586 TOX3O15405 576 aaPredicted RBP17.11■□□□□ 0.33
HMGN1-212ENST00000479586 DPM1O60762 260 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 UBXN7O94888 489 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 GRNP28799 593 aaKnown RBP17.11■□□□□ 0.33
HMGN1-212ENST00000479586 PTPN4P29074 926 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 PTGIRP43119 386 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 NSFP46459 744 aaKnown RBP17.11■□□□□ 0.33
HMGN1-212ENST00000479586 MAXP61244 160 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 PTSQ03393 145 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 LAMB3Q13751 1172 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 HSP90AA4PQ58FG1 418 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 DNAJC24Q6P3W2 148 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 TRIM72Q6ZMU5 477 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 RFX8Q6ZV50 586 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 ZNF765Q7L2R6 523 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 RBMXL3Q8N7X1 1067 aaKnown RBP17.11■□□□□ 0.33
HMGN1-212ENST00000479586 EXD1Q8NHP7 514 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 SEC14L1Q92503 715 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 PLEKHG4BQ96PX9 1271 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 TUBGCP2Q9BSJ2 902 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 CNPY3Q9BT09 278 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 VPS16Q9H269 839 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 DHX35Q9H5Z1 703 aaKnown RBP17.11■□□□□ 0.33
HMGN1-212ENST00000479586 VPS18Q9P253 973 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 PDZD2O15018 2839 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 AKAP9Q99996 3911 aa17.11■□□□□ 0.33
HMGN1-212ENST00000479586 CROCCQ5TZA2 2017 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 DAPK3O43293 454 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 CEACAM4O75871 244 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 CBX6O95503 412 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 PEX11BO96011 259 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 OGDHQ02218 1023 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 ARMC12Q5T9G4 340 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 PWWP2BQ6NUJ5 590 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 TMEM26Q6ZUK4 368 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 PRSS42Q7Z5A4 293 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 SYVN1Q86TM6 617 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 PHF13Q86YI8 300 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-212ENST00000479586 FDCSPQ8NFU4 85 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 PIH1D2Q8WWB5 315 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 RSC1A1Q92681 617 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 SNRNP40Q96DI7 357 aaKnown RBP17.1■□□□□ 0.33
HMGN1-212ENST00000479586 ZNF599Q96NL3 588 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 KCTD15Q96SI1 283 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-212ENST00000479586 NUDT9Q9BW91 350 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 GPR87Q9BY21 358 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 UCK1Q9HA47 277 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 SCHIP1Q9P0W5 487 aaPredicted RBP17.1■□□□□ 0.33
HMGN1-212ENST00000479586 CNOT6Q9ULM6 557 aaKnown RBP17.1■□□□□ 0.33
HMGN1-212ENST00000479586 PPIL1Q9Y3C6 166 aa17.1■□□□□ 0.33
HMGN1-212ENST00000479586 OR5K4A6NMS3 321 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PES1O00541 588 aaKnown RBP17.09■□□□□ 0.33
HMGN1-212ENST00000479586 CALB1P05937 261 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PYGLP06737 847 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PDHA1P08559 390 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 AMD1P17707 334 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 VARSP26640 1264 aaKnown RBP17.09■□□□□ 0.33
HMGN1-212ENST00000479586 TPD52L1Q16890 204 aaPredicted RBP17.09■□□□□ 0.33
HMGN1-212ENST00000479586 CLEC16AQ2KHT3 1053 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 ZRANB3Q5FWF4 1079 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PPP1R15BQ5SWA1 713 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 CACHD1Q5VU97 1274 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 FAM92BQ6ZTR7 304 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 MON1BQ7L1V2 547 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 NLRP8Q86W28 1048 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 AVL9Q8NBF6 648 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 TTC13Q8NBP0 860 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 KLHL6Q8WZ60 621 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 MARVELD3Q96A59 401 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PNPLA2Q96AD5 504 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 MOCOSQ96EN8 888 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 RANBP9Q96S59 729 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PEBP4Q96S96 227 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 MGME1Q9BQP7 344 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 GANQ9H2C0 597 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 ASF1BQ9NVP2 202 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 PCDHGB7Q9Y5F8 929 aa17.09■□□□□ 0.33
HMGN1-212ENST00000479586 NF1P21359 2839 aa17.08■□□□□ 0.33
HMGN1-212ENST00000479586 DIDO1Q9BTC0 2240 aaKnown RBP17.08■□□□□ 0.33
HMGN1-212ENST00000479586 ARHGAP10A1A4S6 786 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 ANKRD62A6NC57 917 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 NELFEP18615 380 aaKnown RBP17.08■□□□□ 0.32
HMGN1-212ENST00000479586 HSPA9P38646 679 aaKnown RBP17.08■□□□□ 0.32
HMGN1-212ENST00000479586 STC1P52823 247 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 RPS15P62841 145 aaKnown RBP17.08■□□□□ 0.32
HMGN1-212ENST00000479586 TUBB3Q13509 450 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 KCNAB1Q14722 419 aa17.08■□□□□ 0.32
HMGN1-212ENST00000479586 PHYKPLQ8IUZ5 450 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms