RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 KIF5AQ12840 1032 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 SLC1A5Q15758 541 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 SIRPB2Q5JXA9 342 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 ZNF569Q5MCW4 686 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 ZDHHC20Q5W0Z9 365 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 MARK2Q7KZI7 788 aaKnown RBP23.19■■□□□ 1.3
C9orf3-215ENST00000478473 SYCE1Q8N0S2 351 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 SFRP1Q8N474 314 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 PATE1Q8WXA2 126 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 GORASP1Q9BQQ3 440 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 SPATA16Q9BXB7 569 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 STRADBQ9C0K7 418 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 ATXN10Q9UBB4 475 aa23.19■■□□□ 1.3
C9orf3-215ENST00000478473 SCN8AQ9UQD0 1980 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 PRR19A6NJB7 356 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 MIF4GDA9UHW6 222 aaKnown RBP23.18■■□□□ 1.3
C9orf3-215ENST00000478473 PLD2O14939 933 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 PPM1DO15297 605 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 TJP3O95049 919 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 CPNE6O95741 557 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 CETN2P41208 172 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 TLE3Q04726 772 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 KIAA1328Q86T90 577 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 Q8N9G6 341 aaPredicted RBP23.18■■□□□ 1.3
C9orf3-215ENST00000478473 FERMT1Q9BQL6 677 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 PRORYQ9H606 182 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.18■■□□□ 1.3
C9orf3-215ENST00000478473 IL17CQ9P0M4 197 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 ZNHIT2Q9UHR6 403 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 RALYQ9UKM9 306 aaKnown RBP23.18■■□□□ 1.3
C9orf3-215ENST00000478473 ACSL6Q9UKU0 697 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 AMFRQ9UKV5 643 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 TMPRSS11EQ9UL52 423 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 PCDHGA7Q9Y5G6 932 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 LOC400499M0QZD8 3231 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 ZFC3H1O60293 1989 aaKnown RBP23.18■■□□□ 1.3
C9orf3-215ENST00000478473 CACNA1GO43497 2377 aa23.18■■□□□ 1.3
C9orf3-215ENST00000478473 PMS2P1A4D2B8 440 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 RHPN2P1A8MT19 583 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 H7C0C1 242 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 GRID2O43424 1007 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 PPFIA2O75334 1257 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 ANXA9O76027 345 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 SLC25A14O95258 325 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-215ENST00000478473 RBP3P10745 1247 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 ZNF8P17098 575 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-215ENST00000478473 CD1CP29017 333 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 ATP5OP48047 213 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 CHCHD2P9Q5T1J5 151 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-215ENST00000478473 ITPRIPL1Q6GPH6 555 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 RANBP10Q6VN20 620 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 RAB11FIP2Q7L804 512 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 TMPRSS9Q7Z410 1059 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 ADGRG6Q86SQ4 1221 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 CDKL3Q8IVW4 592 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-215ENST00000478473 SPACA3Q8IXA5 215 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 DPH1Q9BZG8 443 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 SYNDIG1Q9H7V2 258 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 RSPH14Q9UHP6 348 aa23.17■■□□□ 1.3
C9orf3-215ENST00000478473 ATXN7L1Q9ULK2 861 aaPredicted RBP23.17■■□□□ 1.3
C9orf3-215ENST00000478473 BPTFQ12830 3046 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 VEGFDO43915 354 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 EML2O95834 649 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 ADRA1AP35348 466 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 CHRNA4P43681 627 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 OR1D5P58170 312 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 EIF3EP60228 445 aaKnown RBP23.16■■□□□ 1.3
C9orf3-215ENST00000478473 KLF1Q13351 362 aaPredicted RBP23.16■■□□□ 1.3
C9orf3-215ENST00000478473 CCDC181Q5TID7 509 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 IYDQ6PHW0 289 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 PEX26Q7Z412 305 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 PHYKPLQ8IUZ5 450 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 FBXO39Q8N4B4 442 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 RNF10Q8N5U6 811 aaKnown RBP23.16■■□□□ 1.3
C9orf3-215ENST00000478473 SLC37A2Q8TED4 501 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 DPYSL5Q9BPU6 564 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 C19orf43Q9BQ61 176 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 FOXP3Q9BZS1 431 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 B3GNT4Q9C0J1 378 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 SARS2Q9NP81 518 aaKnown RBP23.16■■□□□ 1.3
C9orf3-215ENST00000478473 IL26Q9NPH9 171 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 TRIM10Q9UDY6 481 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 TBC1D29Q9UFV1 150 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 IGSF10Q6WRI0 2623 aa23.16■■□□□ 1.3
C9orf3-215ENST00000478473 IGHV1OR21-1A0A087WYE8 117 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 DDX3YO15523 660 aaKnown RBP23.15■■□□□ 1.3
C9orf3-215ENST00000478473 TNFSF15O95150 251 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 UGT1A5P35504 534 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 GEMP55040 296 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 ANKRD20A2Q5SQ80 823 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 ANKRD20A1Q5TYW2 823 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 ANKRD20A3Q5VUR7 823 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 ALS2CLQ60I27 953 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 AADACL2Q6P093 401 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 ZNF574Q6ZN55 896 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-215ENST00000478473 CHST15Q7LFX5 561 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-215ENST00000478473 PIM3Q86V86 326 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 IPMKQ8NFU5 416 aa23.15■■□□□ 1.3
C9orf3-215ENST00000478473 CCDC97Q96F63 343 aaPredicted RBP23.15■■□□□ 1.3
C9orf3-215ENST00000478473 HES6Q96HZ4 224 aa23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms