RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 INTS11Q5TA45 600 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 CXorf57Q6NSI4 855 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 PAOXQ6QHF9 649 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 LDB1Q86U70 411 aaPredicted RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 CROCCP3Q8IVE0 287 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 OR13C4Q8NGS5 318 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 RMND5BQ96G75 393 aaPredicted RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 NSMCE3Q96MG7 304 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 TRPC7Q9HCX4 862 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 ACSS2Q9NR19 701 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 DDX18Q9NVP1 670 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 GTSE1Q9NYZ3 720 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 CARNS1A5YM72 827 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 NRP2O60462 931 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 TSPAN3O60637 253 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 URODP06132 367 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 PYGLP06737 847 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 C7P10643 843 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 LAG3P18627 525 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 PSMA3P25788 255 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 CDKN2DP55273 166 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 NHSL2Q5HYW2 709 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 HMBOX1Q6NT76 420 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 DNAJB7Q7Z6W7 309 aaPredicted RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 DDX53Q86TM3 631 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 PCDH20Q8N6Y1 951 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 FAM156AQ8NDB6 213 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 UNKQ9C0B0 810 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 CLK4Q9HAZ1 481 aaKnown RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 SCUBE2Q9NQ36 999 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 TMEM39AQ9NV64 488 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 NLE1Q9NVX2 485 aaPredicted RBP17.14■□□□□ 0.33
LINC00336-201ENST00000477984 SPG21Q9NZD8 308 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 ZNHIT2Q9UHR6 403 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 MAFFQ9ULX9 164 aa17.14■□□□□ 0.33
LINC00336-201ENST00000477984 A0A0J9YVX5 310 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 AQP12BA6NM10 295 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 A8MT66 165 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 PRRG1O14668 218 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 MRASO14807 208 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 STAMBPO95630 424 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 F11P03951 625 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 FDXRP22570 491 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 SCNN1BP51168 640 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 EPHB3P54753 998 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 AGKQ53H12 422 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 RNF219Q5W0B1 726 aaPredicted RBP17.13■□□□□ 0.33
LINC00336-201ENST00000477984 PRMT9Q6P2P2 845 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 ERMP1Q7Z2K6 904 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 TMEM150AQ86TG1 271 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 CUZD1Q86UP6 607 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 AQP12AQ8IXF9 295 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 TCEAL8Q8IYN2 117 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 CMTR2Q8IYT2 770 aaKnown RBP17.13■□□□□ 0.33
LINC00336-201ENST00000477984 OR4L1Q8NH43 312 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 TFAP2CQ92754 450 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 TMEM79Q9BSE2 394 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 TDRD1Q9BXT4 1180 aaKnown RBP17.13■□□□□ 0.33
LINC00336-201ENST00000477984 PCDHAC1Q9H158 963 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 POPDC3Q9HBV1 291 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 CATSPERZQ9NTU4 200 aa17.13■□□□□ 0.33
LINC00336-201ENST00000477984 DUS2Q9NX74 493 aaKnown RBP17.13■□□□□ 0.33
LINC00336-201ENST00000477984 CNOT6Q9ULM6 557 aaKnown RBP17.13■□□□□ 0.33
LINC00336-201ENST00000477984 MYOCOSA0A1B0GUC4 107 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 MBL2P11226 248 aaPredicted RBP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 TCN1P20061 433 aaPredicted RBP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 SUOXP51687 545 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 ZNF140P52738 457 aaPredicted RBP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 PTPRCAPQ14761 206 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 NRF1Q16656 503 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 TYSND1Q2T9J0 566 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 KRT80Q6KB66 452 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 C16orf59Q7L2K0 433 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 PNPLA1Q8N8W4 532 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 OR2T34Q8NGX1 318 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 OR2T3Q8NH03 318 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 MIPOL1Q8TD10 442 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 ANKRD49Q8WVL7 239 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 L3HYPDHQ96EM0 354 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 SGF29Q96ES7 293 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 CYP2S1Q96SQ9 504 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 TCF12Q99081 682 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 GPATCH1Q9BRR8 931 aaKnown RBP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 ATP11BQ9Y2G3 1177 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 MTF2Q9Y483 593 aaPredicted RBP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 SPO11Q9Y5K1 396 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 INSL5Q9Y5Q6 135 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 CBX4O00257 560 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 GPC4O75487 556 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 PRLP01236 227 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 PIRTP0C851 137 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 LBX1P52954 281 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 ARF5P84085 180 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 TAF1AQ15573 450 aaPredicted RBP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 MTX3Q5HYI7 312 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 ZNF549Q6P9A3 640 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 TMEM207Q6UWW9 146 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 LARP4Q71RC2 724 aaKnown RBP eCLIP17.12■□□□□ 0.33
LINC00336-201ENST00000477984 DHFR2Q86XF0 187 aa17.12■□□□□ 0.33
LINC00336-201ENST00000477984 RNF135Q8IUD6 432 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms