RNA–Protein interactions for RNA: ENST00000477334.1

RBM39-231, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-231	ENST00000477334	FGF3	P11487	239 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	ALOX12	P18054	663 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	S1PR1	P21453	382 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	ACADL	P28330	430 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	APOBEC1	P41238	236 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	PDE1C	Q14123	709 aa	Predicted RBP	4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	CCDC96	Q2M329	555 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	SPATA1	Q5VX52	437 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	NSUN5P2	Q63ZY6	315 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	C18orf63	Q68DL7	685 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	CFAP161	Q6P656	301 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	BRAT1	Q6PJG6	821 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	CCDC190	Q86UF4	302 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	GPR180	Q86V85	440 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	ZNF441	Q8N8Z8	693 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	OR5R1	Q8NH85	324 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	FIG4	Q92562	907 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	MAK16	Q9BXY0	300 aa	Known RBP	4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	SLCO5A1	Q9H2Y9	848 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	LRRC4	Q9HBW1	653 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	FBXL2	Q9UKC9	423 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334	AMDHD2	Q9Y303	409 aa		4.18	□□□□□ -1.74
RBM39-231	ENST00000477334		A0A1W2PQ09	198 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	MAGEA13P	A6NCF6	341 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	ACOT8	O14734	319 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	ANKRD28	O15084	1053 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	PLPP2	O43688	288 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	HIST1H2AB	P04908	130 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	MYOD1	P15172	320 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	HIST1H2AD	P20671	130 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	GCH1	P30793	250 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	GNL1	P36915	607 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	FASLG	P48023	281 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	CLDN20	P56880	219 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	SNX16	P57768	344 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	ISL1	P61371	349 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	SREBF2	Q12772	1141 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	COASY	Q13057	564 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	WTAP	Q15007	396 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	RILPL1	Q5EBL4	403 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	CAPRIN2	Q6IMN6	1127 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	HIST3H2A	Q7L7L0	130 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	TSPAN33	Q86UF1	283 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	SFR1	Q86XK3	245 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	RPAP2	Q8IXW5	612 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	HACE1	Q8IYU2	909 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	RASGEF1C	Q8N431	466 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	C1orf131	Q8NDD1	294 aa	Known RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	SLC44A1	Q8WWI5	657 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	ABTB1	Q969K4	478 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	SAT2	Q96F10	170 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	IGSF21	Q96ID5	467 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	DOCK7	Q96N67	2140 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	QRFPR	Q96P65	431 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	NUDCD1	Q96RS6	583 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	CSTL1	Q9H114	145 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	SIL1	Q9H173	461 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	MAGIX	Q9H6Y5	334 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	UBA2	Q9UBT2	640 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	FBXO2	Q9UK22	296 aa	Predicted RBP	4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	CMAHP	Q9Y471	501 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	LRP12	Q9Y561	859 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	PTPRC	P08575	1304 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334	CNTNAP2	Q9UHC6	1331 aa		4.17	□□□□□ -1.74
RBM39-231	ENST00000477334		B4DLN1	442 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	FAM90A26	D6RGX4	464 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	KCNN4	O15554	427 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	CSH1	P0DML2	217 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	CSH2	P0DML3	217 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	TGFB3	P10600	412 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	ACTN1	P12814	892 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	HLA-DOB	P13765	273 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	POR	P16435	677 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	ITGA2	P17301	1181 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	PON1	P27169	355 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	MSH2	P43246	934 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	GPR143	P51810	404 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	MRPL12	P52815	198 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	MFAP4	P55083	255 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	RRP1	P56182	461 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	KRTAP10-7	P60409	375 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	COG7	P83436	770 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	REL	Q04864	619 aa	Predicted RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	ZBTB17	Q13105	803 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	CHAF1B	Q13112	559 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	AIMP2	Q13155	320 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	PRKG2	Q13237	762 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	CUL4A	Q13619	759 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	RAB41	Q5JT25	222 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	PAPD4	Q6PIY7	484 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	GFRAL	Q6UXV0	394 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	TMEM219	Q86XT9	240 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	RNF113B	Q8IZP6	322 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	C1orf87	Q8N0U7	546 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	RBMXL3	Q8N7X1	1067 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	BBS10	Q8TAM1	723 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	SPATA20	Q8TB22	786 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	UTP15	Q8TED0	518 aa	Known RBP	4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	TRPC4AP	Q8TEL6	797 aa		4.16	□□□□□ -1.74
RBM39-231	ENST00000477334	PIGT	Q969N2	578 aa		4.16	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms