RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 ZNF765Q7L2R6 523 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CHST15Q7LFX5 561 aaPredicted RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 RASGRP3Q8IV61 690 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 EXD1Q8NHP7 514 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CT55Q8WUE5 264 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 TCTN2Q96GX1 697 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 ELMO2Q96JJ3 720 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 SMIM14Q96QK8 99 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 MGME1Q9BQP7 344 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 SLC25A23Q9BV35 468 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 ACTL8Q9H568 366 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 ZNF768Q9H5H4 540 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 DHX35Q9H5Z1 703 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 LHX9Q9NQ69 397 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 VPS18Q9P253 973 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 LNPEPQ9UIQ6 1025 aa11.24□□□□□ -0.61
BRCA1-213ENST00000476777 CNOT6Q9ULM6 557 aaKnown RBP11.24□□□□□ -0.61
BRCA1-213ENST00000476777 OR5K4A6NMS3 321 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 C21orf140B9A014 251 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 EPHB6O15197 1021 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 SNX2O60749 519 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 SPAG6O75602 509 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 ASMTLO95671 621 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 LDLRP01130 860 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 PDHA1P08559 390 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 FGF5P12034 268 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 ACP5P13686 325 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 SLC2A4P14672 509 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 TYRP1P17643 537 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 POU3F2P20265 443 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 TNFRSF8P28908 595 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 LEPRP48357 1165 aaKnown RBP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 KLK7P49862 253 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 POLR2FP61218 127 aaKnown RBP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 MAXP61244 160 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 CAMK4Q16566 473 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 ERMARDQ5T6L9 678 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 ARMC12Q5T9G4 340 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 DCUN1D2Q6PH85 259 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 ARFGAP1Q8N6T3 406 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 Q8NA96 180 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 AVL9Q8NBF6 648 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 PRR7Q8TB68 274 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 TGM7Q96PF1 710 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 PEBP4Q96S96 227 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 RUFY1Q96T51 708 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 SNRNP25Q9BV90 132 aaKnown RBP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 RIOK2Q9BVS4 552 aaKnown RBP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 BRD8Q9H0E9 1235 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 UCK1Q9HA47 277 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 ERRFI1Q9UJM3 462 aaPredicted RBP11.23□□□□□ -0.61
BRCA1-213ENST00000476777 SLC30A1Q9Y6M5 507 aa11.23□□□□□ -0.61
BRCA1-213ENST00000476777 KIF1CO43896 1103 aaKnown RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 UBXN7O94888 489 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 TIAF1O95411 115 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 MT-ND3P03897 115 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 ZNF30P17039 623 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 NF1P21359 2839 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 HCAR3P49019 387 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 CCL11P51671 97 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 STC1P52823 247 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 CHAF1BQ13112 559 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 LAMB3Q13751 1172 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 DPYSQ14117 519 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 UGT8Q16880 541 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 PPP6R3Q5H9R7 873 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 RALGPS1Q5JS13 557 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 C1QL3Q5VWW1 255 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 JMJD6Q6NYC1 403 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 TMEM26Q6ZUK4 368 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 CYP4V2Q6ZWL3 525 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 PRSS42Q7Z5A4 293 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 PPP1R3BQ86XI6 285 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 THAP4Q8WY91 577 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 SEC14L1Q92503 715 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 PLEKHG4BQ96PX9 1271 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 GPR87Q9BY21 358 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 ING2Q9H160 280 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 RMI1Q9H9A7 625 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 AKIRIN1Q9H9L7 192 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 NLRC4Q9NPP4 1024 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 FAM207AQ9NSI2 230 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 PKDREJQ9NTG1 2253 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 CWC15Q9P013 229 aaKnown RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 SCHIP1Q9P0W5 487 aaPredicted RBP11.22□□□□□ -0.61
BRCA1-213ENST00000476777 PCSK1NQ9UHG2 260 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 SRPK3Q9UPE1 567 aa11.22□□□□□ -0.61
BRCA1-213ENST00000476777 DCHS2Q6V1P9 2916 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 A0A0J9YYE9 177 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 FZD6O60353 706 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 TRBC1P01850 177 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 DESP17661 470 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 XRCC1P18887 633 aaPredicted RBP11.21□□□□□ -0.61
BRCA1-213ENST00000476777 PSMA2P25787 234 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 ELAVL4P26378 380 aaKnown RBP11.21□□□□□ -0.61
BRCA1-213ENST00000476777 PTPN4P29074 926 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 CLCNKAP51800 687 aa11.21□□□□□ -0.61
BRCA1-213ENST00000476777 RPS18P62269 152 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms