RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 PCCBP05166 539 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 NME1P15531 152 aaKnown RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 XPAP23025 273 aaPredicted RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 MMP12P39900 470 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 ARL4AP40617 200 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 HCAR3P49019 387 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 GBE1Q04446 702 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 RAD51Q06609 339 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 IL10RBQ08334 325 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 CCDC15Q0P6D6 951 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 TRAF2Q12933 501 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 DPYSL3Q14195 570 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 PIGHQ14442 188 aaPredicted RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 SMAD1Q15797 465 aaKnown RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 SLC18A3Q16572 532 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 DEFB133Q30KQ1 61 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 INAVAQ3KP66 663 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 TMEM52BQ4KMG9 183 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 BOLA3Q53S33 107 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 HES3Q5TGS1 186 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 TMCO4Q5TGY1 634 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 NCBP2-AS2Q69YL0 99 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 CRTC1Q6UUV9 634 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 TMCO3Q6UWJ1 677 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 RFLNAQ6ZTI6 216 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 B4GALNT4Q76KP1 1039 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 PSTKQ8IV42 348 aaKnown RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 SFTPA2Q8IWL1 248 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 PQLC3Q8N755 202 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 ZNF548Q8NEK5 533 aaPredicted RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 OR8K1Q8NGG5 319 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 LMX1AQ8TE12 382 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 RAPGEF5Q92565 580 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 RAB7BQ96AH8 199 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 FRMD6Q96NE9 622 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 LENG8Q96PV6 779 aaPredicted RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 CPEB1Q9BZB8 566 aaKnown RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 GOLPH3Q9H4A6 298 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 NOD2Q9HC29 1040 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 ABHD10Q9NUJ1 306 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 ATP8A1Q9Y2Q0 1164 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 OR1A2Q9Y585 309 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.93□□□□□ -1.149e-8■■□□□ 12.3
CHD6-207ENST00000476641 HS3ST3A1Q9Y663 406 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 TP53BP1Q12888 1972 aaPredicted RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 LOC400499M0QZD8 3231 aa7.93□□□□□ -1.14
CHD6-207ENST00000476641 TDRD6O60522 2096 aaKnown RBP7.93□□□□□ -1.14
CHD6-207ENST00000476641 SMG1Q96Q15 3661 aaKnown RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 TRABD2BA6NFA1 517 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 EIF3CLB5ME19 914 aaKnown RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 HRKO00198 91 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 YKT6O15498 198 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 MAGEC1O60732 1142 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 CSF2P04141 144 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 H2AFZP0C0S5 128 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 CTPS1P17812 591 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 CR2P20023 1033 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 PTMSP20962 102 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 RABIFP47224 123 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 CYP4F3Q08477 520 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 SLC10A2Q12908 348 aaPredicted RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 TARDBPQ13148 414 aaKnown RBP eCLIP7.92□□□□□ -1.14
CHD6-207ENST00000476641 TBX2Q13207 712 aaPredicted RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 ZNF235Q14590 738 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 MESDQ14696 234 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 ACAP1Q15027 740 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 LLGL1Q15334 1064 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 VMACQ2NL98 169 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 ALG11Q2TAA5 492 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 CFAP58Q5T655 872 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 DENND2CQ68D51 928 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 KRTAP5-3Q6L8H2 238 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 C19orf48Q6RUI8 117 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 H2AFVQ71UI9 128 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 TSPAN33Q86UF1 283 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 PARGQ86W56 976 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 PHACTR4Q8IZ21 702 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 ATPAF2Q8N5M1 289 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 DENND6BQ8NEG7 585 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 OR4C6Q8NH72 309 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 PDCD6IPQ8WUM4 868 aaKnown RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 TEKT4Q8WW24 435 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 TSACCQ96A04 125 aaPredicted RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 ECHDC3Q96DC8 303 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 PDXPQ96GD0 296 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 APOLD1Q96LR9 279 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 PSKH2Q96QS6 385 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 EIF3CQ99613 913 aaKnown RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 LRRC61Q9BV99 259 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 CLPBQ9H078 707 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 DEF6Q9H4E7 631 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 ATP13A3Q9H7F0 1226 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 NHEJ1Q9H9Q4 299 aaPredicted RBP7.92□□□□□ -1.14
CHD6-207ENST00000476641 NT5MQ9NPB1 228 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 B4GALT6Q9UBX8 382 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 ZNF281Q9Y2X9 895 aa7.92□□□□□ -1.14
CHD6-207ENST00000476641 ATRXP46100 2492 aa7.91□□□□□ -1.14
CHD6-207ENST00000476641 IGSF10Q6WRI0 2623 aa7.91□□□□□ -1.14
CHD6-207ENST00000476641 BPTFQ12830 3046 aa7.91□□□□□ -1.14
CHD6-207ENST00000476641 PMS2P1A4D2B8 440 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms