RNA–Protein interactions for RNA: ENST00000476513.1

APOBEC3F-203, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

TSL 3

Gene APOBEC3F, Length 730 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-203ENST00000476513 SLC25A23Q9BV35 468 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 ACTL8Q9H568 366 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 ZNF768Q9H5H4 540 aaKnown RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 UCK1Q9HA47 277 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 LHX9Q9NQ69 397 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 IGSF5Q9NSI5 407 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 CWC15Q9P013 229 aaKnown RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 PCDHGA9Q9Y5G4 932 aaKnown RBP16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 SLC30A1Q9Y6M5 507 aa16.25■□□□□ 0.19
APOBEC3F-203ENST00000476513 WIPF3A6NGB9 483 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 C21orf140B9A014 251 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 FZD6O60353 706 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 MAFKO60675 156 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 ZNF30P17039 623 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 PSMA2P25787 234 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 STC1P52823 247 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 CHAF1BQ13112 559 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 SYCP1Q15431 976 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 DPCR1Q3MIW9 517 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 CYP4V2Q6ZWL3 525 aaPredicted RBP16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 TICAM1Q8IUC6 712 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 MCOLN2Q8IZK6 566 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 BBS5Q8N3I7 341 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 AVL9Q8NBF6 648 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 RUFY1Q96T51 708 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 MED13Q9UHV7 2174 aa16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 TNRC6AQ8NDV7 1962 aaKnown RBP16.24■□□□□ 0.19
APOBEC3F-203ENST00000476513 KIF1CO43896 1103 aaKnown RBP16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 RASSF9O75901 435 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 UBXN7O94888 489 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 TIAF1O95411 115 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 MT-ND3P03897 115 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 EEF1GP26641 437 aaKnown RBP16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 CCL11P51671 97 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 UGT8Q16880 541 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 PAPD7Q5XG87 772 aaKnown RBP16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 TMEM26Q6ZUK4 368 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 PPP1R3BQ86XI6 285 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 NDUFAF2Q8N183 169 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 PRR7Q8TB68 274 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 THAP4Q8WY91 577 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 TCTN2Q96GX1 697 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 WDR24Q96S15 920 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 AGPAT1Q99943 283 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 BRD8Q9H0E9 1235 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 RMI1Q9H9A7 625 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 ETNK2Q9NVF9 386 aa16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 SCHIP1Q9P0W5 487 aaPredicted RBP16.23■□□□□ 0.19
APOBEC3F-203ENST00000476513 A0A0J9YYE9 177 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 TRBC1P01850 177 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 AMD1P17707 334 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 XRCC1P18887 633 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 MIPP30301 263 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 MMP13P45452 471 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ZNF135P52742 658 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 RPS18P62269 152 aaKnown RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 MAMLD1Q13495 774 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 MARC1Q5VT66 337 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ACAD10Q6JQN1 1059 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 PRSS42Q7Z5A4 293 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 PHYKPLQ8IUZ5 450 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 PSTKQ8IV42 348 aaKnown RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 KLHL6Q8WZ60 621 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 SEC14L1Q92503 715 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ING2Q9H160 280 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 AKIRIN1Q9H9L7 192 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ACSS2Q9NR19 701 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 LUZP4Q9P127 313 aa16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ERRFI1Q9UJM3 462 aaPredicted RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ZNF106Q9H2Y7 1883 aaKnown RBP16.22■□□□□ 0.19
APOBEC3F-203ENST00000476513 ARGFXA6NJG6 315 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 FADS2P1A8MWK0 482 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 GRID2O43424 1007 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 PRPSAP2O60256 369 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 LDLRP01130 860 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 AMPD1P23109 780 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 TNFRSF8P28908 595 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 PTPN4P29074 926 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 SLC19A1P41440 591 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 CLCNKAP51800 687 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 CACHD1Q5VU97 1274 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 JMJD6Q6NYC1 403 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 FAM199XQ6PEV8 388 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 Q8NA96 180 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 NSMCE1Q8WV22 266 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 RSC1A1Q92681 617 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 GPR87Q9BY21 358 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 SLC29A3Q9BZD2 475 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 TRIM7Q9C029 511 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 NT5MQ9NPB1 228 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 KLC4Q9NSK0 619 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 ZNF624Q9P2J8 865 aaPredicted RBP16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 SIK3Q9Y2K2 1263 aa16.21■□□□□ 0.19
APOBEC3F-203ENST00000476513 NUAK1O60285 661 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 CLDN7O95471 211 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 VIPP01282 170 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 ZNF8P17098 575 aaPredicted RBP16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 EPHB1P54762 984 aa16.2■□□□□ 0.18
APOBEC3F-203ENST00000476513 IL10RAQ13651 578 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms