RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 NDNFQ8TB73 568 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TRPC4APQ8TEL6 797 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 FAM149B1Q96BN6 582 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ZFP42Q96MM3 310 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 PSD2Q9BQI7 771 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 PAAF1Q9BRP4 392 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 COLEC11Q9BWP8 271 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TDRD1Q9BXT4 1180 aaKnown RBP8.35□□□□□ -1.07
VAPB-205ENST00000476395 RAD21L1Q9H4I0 556 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 TMEM181Q9P2C4 612 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 GIMAP2Q9UG22 337 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 USP22Q9UPT9 525 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 IFT52Q9Y366 437 aa8.35□□□□□ -1.07
VAPB-205ENST00000476395 ARPC4-TTLL3A0A0A6YYG9 625 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CES1P23141 567 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 LRPAP1P30533 357 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 NPY2RP49146 381 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CAPRIN1Q14444 709 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 CYBRD1Q53TN4 286 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.34□□□□□ -1.07
VAPB-205ENST00000476395 BTBD8Q5XKL5 378 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 REP15Q6BDI9 236 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 UGT3A1Q6NUS8 523 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CHPFQ8IZ52 775 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 ELMOD1Q8N336 334 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CCNYL1Q8N7R7 359 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 LINC00469Q8N7U9 141 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 C7orf57Q8NEG2 295 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 TP53INP1Q96A56 240 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 ZNF486Q96H40 463 aaPredicted RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 PCED1BQ96HM7 432 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 MRGPRX2Q96LB1 330 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 MUS81Q96NY9 551 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 TCF12Q99081 682 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 C1orf50Q9BV19 199 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 FUNDC2Q9BWH2 189 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 MRPL46Q9H2W6 279 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 GSTO2Q9H4Y5 243 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 MROH8Q9H579 483 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PIF1Q9H611 641 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 FBRSL1Q9HCM7 1045 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 ATP13A1Q9HD20 1204 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 MIOSQ9NXC5 875 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 UBQLN1Q9UMX0 589 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 ANKRD6Q9Y2G4 727 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CSADQ9Y600 493 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PMF1-BGLAPU3KQ54 211 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CHD5Q8TDI0 1954 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 A0A1W2PRQ8 180 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CCRL2O00421 344 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PPP6CO00743 305 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CXCL11O14625 94 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 ACOX3O15254 700 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 HOXC11O43248 304 aaPredicted RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 SSX4O60224 188 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 SNX2O60749 519 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 NOL3O60936 208 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 NCK1P16333 377 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 TSPAN8P19075 237 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 AXLP30530 894 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 RAB15P59190 212 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 DNAJB13P59910 316 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PRKAA1Q13131 559 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 AGKQ53H12 422 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PKN3Q6P5Z2 889 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 SLC16A12Q6ZSM3 486 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 ERO1BQ86YB8 467 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 POM121Q96HA1 1249 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PAWRQ96IZ0 340 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 UBXN10Q96LJ8 280 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 ZNF347Q96SE7 839 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 AKIP1Q9NQ31 210 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 MAP10Q9P2G4 905 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 MTRRQ9UBK8 725 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 SUCOQ9UBS9 1254 aaKnown RBP8.34□□□□□ -1.07
VAPB-205ENST00000476395 AASSQ9UDR5 926 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 PSME2Q9UL46 239 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 IPPQ9Y573 584 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 RAD54BQ9Y620 910 aa8.34□□□□□ -1.07
VAPB-205ENST00000476395 HEATR9A2RTY3 570 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 GLTPD2A6NH11 291 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 ERI2A8K979 691 aaKnown RBP8.33□□□□□ -1.08
VAPB-205ENST00000476395 NPHS1O60500 1241 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 KCNK2O95069 426 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 JCHAINP01591 159 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 PCNAP12004 261 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 YWHAQP27348 245 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 HOXC13P31276 330 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 S100A5P33763 92 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 TSPAN7P41732 249 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 HK2P52789 917 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 RAB10P61026 200 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SLC12A1Q13621 1099 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 DPY19L1Q2PZI1 675 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 SDE2Q6IQ49 451 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 LARP4Q71RC2 724 aaKnown RBP eCLIP8.33□□□□□ -1.08
VAPB-205ENST00000476395 ERMP1Q7Z2K6 904 aa8.33□□□□□ -1.08
VAPB-205ENST00000476395 IFNEQ86WN2 208 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms