RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 PON1P27169 355 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 ACADLP28330 430 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 HOXA13P31271 388 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 TMPOP42166 694 aaKnown RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 FASLGP48023 281 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 MRPL12P52815 198 aaKnown RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 BRWD1-AS2P59051 145 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 SREBF2Q12772 1141 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 IZUMO4Q1ZYL8 232 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 RAB41Q5JT25 222 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 PLEKHS1Q5SXH7 462 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 TMEM198Q66K66 360 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF324BQ6AW86 544 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 CCDC190Q86UF4 302 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 GPR180Q86V85 440 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 NRROSQ86YC3 692 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 TAGAPQ8N103 731 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 TMTC2Q8N394 836 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 ACVR1CQ8NER5 493 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 SPATA22Q8NHS9 363 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 TAAR8Q969N4 342 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 CALML4Q96GE6 196 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 ZNF385AQ96PM9 386 aaKnown RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 MAGIXQ9H6Y5 334 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 GAREM1Q9H706 876 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 SUCLA2Q9P2R7 463 aaPredicted RBP4.88□□□□□ -1.63
PTCD3-211ENST00000476215 FBXL2Q9UKC9 423 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 VDAC3Q9Y277 283 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 KLHL20Q9Y2M5 609 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 AMDHD2Q9Y303 409 aa4.88□□□□□ -1.63
PTCD3-211ENST00000476215 ARHGEF40Q8TER5 1519 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 A0A0G2JPF8 293 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 HNRNPCL3B7ZW38 293 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 K7ENM7 598 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 KCNN4O15554 427 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 HNRNPCL4P0DMR1 293 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 S1PR1P21453 382 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 CORO1AP31146 461 aaKnown RBP4.87□□□□□ -1.63
PTCD3-211ENST00000476215 ACTN2P35609 894 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 APOBEC1P41238 236 aaKnown RBP4.87□□□□□ -1.63
PTCD3-211ENST00000476215 MSH2P43246 934 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 GPR143P51810 404 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 MFAP4P55083 255 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 KIF19Q2TAC6 998 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 NSUN5P2Q63ZY6 315 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 C18orf63Q68DL7 685 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 BRAT1Q6PJG6 821 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 C16orf82Q7Z2V1 217 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 ARMC9Q7Z3E5 817 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 TRPC4APQ8TEL6 797 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 BICD1Q96G01 975 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 QRFPRQ96P65 431 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 SMC6Q96SB8 1091 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 PCYT2Q99447 389 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 C1QTNF1Q9BXJ1 281 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 PADI1Q9ULC6 663 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 PADI3Q9ULW8 664 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 PCDHGB4Q9UN71 923 aa4.87□□□□□ -1.63
PTCD3-211ENST00000476215 PDS5AQ29RF7 1337 aaKnown RBP4.87□□□□□ -1.63
PTCD3-211ENST00000476215 NOTCH4Q99466 2003 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SAA2-SAA4A0A096LPE2 208 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PLSCR5A0PG75 271 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 MAGEA13PA6NCF6 341 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 HNRNPCL2B2RXH8 293 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 FAM90A26D6RGX4 464 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PRR23D1E9PI22 279 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 CTDSP2O14595 271 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 MAP2K7O14733 419 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SMAD9O15198 467 aaKnown RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 AHCYL1O43865 530 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PPP1R3DO95685 299 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 LDHCP07864 332 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PRR23D2P0DMB1 279 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 BDNFP23560 247 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 GNL1P36915 607 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SLC15A1P46059 708 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SLC20A2Q08357 652 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 EPS8Q12929 822 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 ASIC2Q16515 512 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 MYLK3Q32MK0 819 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 RARS2Q5T160 578 aaKnown RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 C9orf57Q5W0N0 161 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PAPD4Q6PIY7 484 aaKnown RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PRSS57Q6UWY2 283 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 RBM23Q86U06 439 aaKnown RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SFR1Q86XK3 245 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 ODF3L1Q8IXM7 274 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 OR5R1Q8NH85 324 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SLC20A1Q8WUM9 679 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 DNAAF4Q8WXU2 420 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 FIG4Q92562 907 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 RSRC1Q96IZ7 334 aaKnown RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 SEMA3CQ99985 751 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 NUDT16L1Q9BRJ7 211 aaKnown RBP4.86□□□□□ -1.63
PTCD3-211ENST00000476215 TMEM39BQ9GZU3 492 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 TMEM5Q9Y2B1 443 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 PCDHGB1Q9Y5G3 927 aa4.86□□□□□ -1.63
PTCD3-211ENST00000476215 EME2A4GXA9 379 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-211ENST00000476215 C4orf47A7E2U8 309 aa4.85□□□□□ -1.63
PTCD3-211ENST00000476215 CLGNO14967 610 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms