RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 C11orf24Q96F05 449 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 AHCYL2Q96HN2 611 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ITCHQ96J02 903 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 PARK7Q99497 189 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 SLC4A5Q9BY07 1137 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 DHX33Q9H6R0 707 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ARL15Q9NXU5 204 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ST3GAL5Q9UNP4 418 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ATRXP46100 2492 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 A0A1W2PQ72 361 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 METTL21EPA6NDL7 271 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ACOT8O14734 319 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ERCC2P18074 760 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CRATP43155 626 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 HNRNPFP52597 415 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 RPL7AP62424 266 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 POLR2LP62875 67 aaKnown RBP11.47□□□□□ -0.57
U2AF1-209ENST00000475639 IL18R1Q13478 541 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 NHSL2Q5HYW2 709 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 CYP20A1Q6UW02 462 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 HERC6Q8IVU3 1022 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 FAM156AQ8NDB6 213 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 RXFP2Q8WXD0 754 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 LRTOMTQ8WZ04 291 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ELMO1Q92556 727 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 NYAP2Q9P242 653 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 TRHDEQ9UKU6 1024 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 DSEQ9UL01 958 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 ST14Q9Y5Y6 855 aa11.47□□□□□ -0.57
U2AF1-209ENST00000475639 SHANK3Q9BYB0 1731 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 VAPBO95292 243 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 IFNA16P05015 189 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 DBIP07108 87 aaKnown RBP11.46□□□□□ -0.57
U2AF1-209ENST00000475639 NFKB1P19838 968 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 CDKN2BP42772 138 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 SUZ12Q15022 739 aaKnown RBP11.46□□□□□ -0.57
U2AF1-209ENST00000475639 MAPKAPK3Q16644 382 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 CTXN3Q4LDR2 81 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 IL27RAQ6UWB1 636 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 KCNMB4Q86W47 210 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 MMAAQ8IVH4 418 aaKnown RBP11.46□□□□□ -0.57
U2AF1-209ENST00000475639 STK40Q8N2I9 435 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 TNFAIP8L1Q8WVP5 186 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 CIB1Q99828 191 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 PLAC1Q9HBJ0 212 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 GPATCH2LQ9NWQ4 482 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 RNF181Q9P0P0 153 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 BTN3A1O00481 513 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 ADRB2P07550 413 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 EPHB3P54753 998 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 ADAM17P78536 824 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 MTX3Q5HYI7 312 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 NOL9Q5SY16 702 aaKnown RBP11.46□□□□□ -0.57
U2AF1-209ENST00000475639 SLC9A4Q6AI14 798 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 ZNF280DQ6N043 979 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 OR10H5Q8NGA6 315 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 TRNT1Q96Q11 434 aaKnown RBP11.46□□□□□ -0.57
U2AF1-209ENST00000475639 HSD17B14Q9BPX1 270 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 MXRA8Q9BRK3 442 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 CYP3A43Q9HB55 503 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 TLL2Q9Y6L7 1015 aa11.46□□□□□ -0.57
U2AF1-209ENST00000475639 CNTNAP2Q9UHC6 1331 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 DOT1LQ8TEK3 1739 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 FAM172BPA6NC97 362 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 RGS10O43665 173 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 JRKO75564 520 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 PIGNO95427 931 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 NADKO95544 446 aaPredicted RBP11.46□□□□□ -0.58
U2AF1-209ENST00000475639 METTL18O95568 372 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.58
U2AF1-209ENST00000475639 WEE1P30291 646 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 TPTEP56180 551 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 ZFP69Q49AA0 526 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 ZNF772Q68DY9 489 aaPredicted RBP11.46□□□□□ -0.58
U2AF1-209ENST00000475639 MOXD1Q6UVY6 613 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 RNF180Q86T96 592 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 MCFD2Q8NI22 146 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 SYTL5Q8TDW5 730 aaPredicted RBP11.46□□□□□ -0.58
U2AF1-209ENST00000475639 TAS1R2Q8TE23 839 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 ATL1Q8WXF7 558 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 CST11Q9H112 138 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 EMCNQ9ULC0 261 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 ANGPT4Q9Y264 503 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 ANKRD6Q9Y2G4 727 aa11.46□□□□□ -0.58
U2AF1-209ENST00000475639 RGSL1A5PLK6 1076 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 GPR182O15218 404 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 SCN2BO60939 215 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 NTSR2O95665 410 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 LSM8O95777 96 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 RPLP2P05387 115 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 ANXA5P08758 320 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CSH1P0DML2 217 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CSH2P0DML3 217 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 NR2F1P10589 423 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 EIF5AP63241 154 aaKnown RBP11.45□□□□□ -0.58
U2AF1-209ENST00000475639 KCNA10Q16322 511 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 GRIK5Q16478 980 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CRY1Q16526 586 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 AGAP7PQ5VUJ5 663 aa11.45□□□□□ -0.58
U2AF1-209ENST00000475639 CYP2U1Q7Z449 544 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms