RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 KIAA0754O94854 1291 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 DDAH2O95865 285 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 ATP1A1P05023 1023 aaKnown RBP12.45□□□□□ -0.42
SKA3-206ENST00000475251 GPR89BP0CG08 455 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 ZNF28P17035 718 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 AMD1P17707 334 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 TNFAIP3P21580 790 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 GNLYP22749 145 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 UQCRFS1P47985 274 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 CLCNKAP51800 687 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 ITKQ08881 620 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 DPYSL2Q16555 572 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 CDKAL1Q5VV42 579 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 RFLNAQ6ZTI6 216 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 TRIM48Q8IWZ4 208 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 TP53INP2Q8IXH6 220 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 THAP4Q8WY91 577 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 AGAP2Q99490 1192 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 TBC1D10AQ9BXI6 508 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 CARD9Q9H257 536 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 RTN4Q9NQC3 1192 aaKnown RBP12.45□□□□□ -0.42
SKA3-206ENST00000475251 LNPEPQ9UIQ6 1025 aa12.45□□□□□ -0.42
SKA3-206ENST00000475251 RGSL1A5PLK6 1076 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 TMEM191CA6NGB0 347 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 GRID2O43424 1007 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 LRCH4O75427 683 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 RASSF9O75901 435 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 MTA2O94776 668 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 UBXN7O94888 489 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 VIPP01282 170 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 PDHA1P08559 390 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 FGF5P12034 268 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 XRCC1P18887 633 aaPredicted RBP12.44□□□□□ -0.42
SKA3-206ENST00000475251 VARSP26640 1264 aaKnown RBP12.44□□□□□ -0.42
SKA3-206ENST00000475251 PCK1P35558 622 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 PGDP52209 483 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 GFERP55789 205 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 RPL26P61254 145 aaKnown RBP12.44□□□□□ -0.42
SKA3-206ENST00000475251 UBE2IP63279 158 aaKnown RBP12.44□□□□□ -0.42
SKA3-206ENST00000475251 SEMA5AQ13591 1074 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 DNASE1L3Q13609 305 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 PTPRRQ15256 657 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.44□□□□□ -0.42
SKA3-206ENST00000475251 BOLA3Q53S33 107 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 TMEM26Q6ZUK4 368 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 CYP4V2Q6ZWL3 525 aaPredicted RBP12.44□□□□□ -0.42
SKA3-206ENST00000475251 PRSS42Q7Z5A4 293 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 AOPEPQ8N6M6 819 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 ARFGAP1Q8N6T3 406 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 CCHCR1Q8TD31 782 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 TGM7Q96PF1 710 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 NUP62CLQ9H1M0 184 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 PDE7BQ9NP56 450 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 NT5MQ9NPB1 228 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 LHX9Q9NQ69 397 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 PKD2L2Q9NZM6 624 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 RPL26L1Q9UNX3 145 aaKnown RBP12.44□□□□□ -0.42
SKA3-206ENST00000475251 PRKAB1Q9Y478 270 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 SCINQ9Y6U3 715 aa12.44□□□□□ -0.42
SKA3-206ENST00000475251 LGALS16A8MUM7 142 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 TMCO5BA8MYB1 307 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 NUAK1O60285 661 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 SPAG6O75602 509 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 FURINP09958 794 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 AMPD1P23109 780 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 SEPHS1P49903 392 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 UBXN1Q04323 297 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 HIST2H2BCQ6DN03 193 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 TIGD7Q6NT04 549 aaPredicted RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 POLNQ7Z5Q5 900 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 BPHLQ86WA6 291 aaPredicted RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 RBM12BQ8IXT5 1001 aaKnown RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 TEX26Q8N6G2 289 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 ZDHHC12Q96GR4 267 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 FCRL4Q96PJ5 515 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 CSPG4P5Q96PW8 444 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 PLEKHG4BQ96PX9 1271 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 LYSMD1Q96S90 227 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 SLC25A23Q9BV35 468 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 TDRD1Q9BXT4 1180 aaKnown RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 GPR87Q9BY21 358 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 SLC29A3Q9BZD2 475 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 OSGEPL1Q9H4B0 414 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 FAM83DQ9H4H8 585 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 MRPL47Q9HD33 250 aaKnown RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 POT1Q9NUX5 634 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 AMACRQ9UHK6 382 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 G3BP2Q9UN86 482 aaKnown RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 PCDHGB7Q9Y5F8 929 aa12.43□□□□□ -0.42
SKA3-206ENST00000475251 PCDHGA9Q9Y5G4 932 aaKnown RBP12.43□□□□□ -0.42
SKA3-206ENST00000475251 ZNF106Q9H2Y7 1883 aaKnown RBP12.42□□□□□ -0.42
SKA3-206ENST00000475251 A0A0U1RQS6 177 aa12.42□□□□□ -0.42
SKA3-206ENST00000475251 C1orf232A0A0U1RR37 186 aa12.42□□□□□ -0.42
SKA3-206ENST00000475251 CLDN7O95471 211 aa12.42□□□□□ -0.42
SKA3-206ENST00000475251 TYRP1P17643 537 aa12.42□□□□□ -0.42
SKA3-206ENST00000475251 CAPZBP47756 277 aa12.42□□□□□ -0.42
SKA3-206ENST00000475251 SPINT3P49223 89 aa12.42□□□□□ -0.42
SKA3-206ENST00000475251 SH3BP2P78314 561 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms