RNA–Protein interactions for RNA: ENST00000475146.1

CPNE1-223, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 627 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-223ENST00000475146 SLC13A5Q86YT5 568 aaPredicted RBP23.78■■□□□ 1.4
CPNE1-223ENST00000475146 PATE1Q8WXA2 126 aa23.78■■□□□ 1.4
CPNE1-223ENST00000475146 GFM1Q96RP9 751 aaKnown RBP23.78■■□□□ 1.4
CPNE1-223ENST00000475146 TRIM39Q9HCM9 518 aa23.78■■□□□ 1.4
CPNE1-223ENST00000475146 IL17CQ9P0M4 197 aa23.78■■□□□ 1.4
CPNE1-223ENST00000475146 RHPN2P1A8MT19 583 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 GRID2O43424 1007 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 NUDT21O43809 227 aaKnown RBP23.77■■□□□ 1.4
CPNE1-223ENST00000475146 NUAK1O60285 661 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 MTX2O75431 263 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 GDF10P55107 478 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 SPARCL1Q14515 664 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 CRTC3Q6UUV7 619 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 FAM151BQ6UXP7 276 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 RANBP10Q6VN20 620 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 NAGSQ8N159 534 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 GDAP1Q8TB36 358 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 TBL1YQ9BQ87 522 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 LRRN3Q9H3W5 708 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 IL26Q9NPH9 171 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 APPL1Q9UKG1 709 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 KCNK6Q9Y257 313 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 PPP2R2CQ9Y2T4 447 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 CACNA1BQ00975 2339 aa23.77■■□□□ 1.4
CPNE1-223ENST00000475146 USP24Q9UPU5 2620 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 NTN3O00634 580 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-223ENST00000475146 STX7O15400 261 aaKnown RBP23.76■■□□□ 1.39
CPNE1-223ENST00000475146 PNLIPP16233 465 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 PARP6Q2NL67 630 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 P3H1Q32P28 736 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 ATP13A5Q4VNC0 1218 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 SPRED1Q7Z699 444 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 ADGRG6Q86SQ4 1221 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 C17orf82Q86X59 251 aaPredicted RBP23.76■■□□□ 1.39
CPNE1-223ENST00000475146 ARL14Q8N4G2 192 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 TRIM58Q8NG06 486 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 ATXN7L3BQ96GX2 97 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 VPS35Q96QK1 796 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 RAXQ9Y2V3 346 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 ENTPD2Q9Y5L3 495 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 ARL5AQ9Y689 179 aa23.76■■□□□ 1.39
CPNE1-223ENST00000475146 GLYATL1P3A0A0U1RQE8 302 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 A0A1W2PQM1 296 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 C2orf81A6NN90 581 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 D6RAR5 112 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 LIASO43766 372 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 BRINP1O60477 761 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 METTL18O95568 372 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 MPOP05164 745 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 LPOP22079 712 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-223ENST00000475146 GABREP78334 506 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 TAF1AQ15573 450 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-223ENST00000475146 CHRNA6Q15825 494 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 TAB3Q8N5C8 712 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-223ENST00000475146 GRAMD1AQ96CP6 724 aa23.75■■□□□ 1.39
CPNE1-223ENST00000475146 FRMD8P1Q9BZ68 369 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-223ENST00000475146 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP23.75■■□□□ 1.39
CPNE1-223ENST00000475146 COL27A1Q8IZC6 1860 aaPredicted RBP23.75■■□□□ 1.39
CPNE1-223ENST00000475146 GPR89AB7ZAQ6 455 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 VEGFDO43915 354 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 SNX2O60749 519 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 PPFIA2O75334 1257 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 KRT37O76014 449 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 GPR89BP0CG08 455 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 GTF2H3Q13889 308 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 PTPRCAPQ14761 206 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 PLA2G4EQ3MJ16 856 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 KHDC1Q4VXA5 237 aaKnown RBP23.74■■□□□ 1.39
CPNE1-223ENST00000475146 C3orf38Q5JPI3 329 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 C1orf54Q8WWF1 131 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 TMPRSS11EQ9UL52 423 aa23.74■■□□□ 1.39
CPNE1-223ENST00000475146 TRBV23OR9-2A0A075B6M9 112 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 GPR39O43194 453 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 CDK14O94921 469 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 ALDH4A1P30038 563 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 PDX1P52945 283 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 SNX1Q13596 522 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 INSCQ1MX18 579 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 LRRTM4Q86VH4 590 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 KLHDC8BQ8IXV7 354 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 OR4K2Q8NGD2 314 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 OSGEPL1Q9H4B0 414 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 LRRC40Q9H9A6 602 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 POLR1BQ9H9Y6 1135 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 FEZ2Q9UHY8 353 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-223ENST00000475146 ATXN7L1Q9ULK2 861 aaPredicted RBP23.73■■□□□ 1.39
CPNE1-223ENST00000475146 SATB2Q9UPW6 733 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 ZNF148Q9UQR1 794 aa23.73■■□□□ 1.39
CPNE1-223ENST00000475146 ZFC3H1O60293 1989 aaKnown RBP23.72■■□□□ 1.39
CPNE1-223ENST00000475146 ZW10O43264 779 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 UGT1A9O60656 530 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 CRTAMO95727 393 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 EML2O95834 649 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 IFNB1P01574 187 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 UGT1A6P19224 532 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 UGT1A1P22309 533 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 UGT1A4P22310 534 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 STIP1P31948 543 aaKnown RBP23.72■■□□□ 1.39
CPNE1-223ENST00000475146 UGT1A3P35503 534 aa23.72■■□□□ 1.39
CPNE1-223ENST00000475146 UGT1A5P35504 534 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms