RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 ZNHIT2Q9UHR6 403 aa18.74■□□□□ 0.59
SYF2-203ENST00000474160 CLCA2Q9UQC9 943 aa18.74■□□□□ 0.59
SYF2-203ENST00000474160 ARL5AQ9Y689 179 aa18.74■□□□□ 0.59
SYF2-203ENST00000474160 PTPRBP23467 1997 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 CPED1A4D0V7 1026 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 KLHL33A6NCF5 533 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 E7EVH7 732 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 H7C0S8 307 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 PGRMC1O00264 195 aaKnown RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 NOBOXO60393 691 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 ATP1A1P05023 1023 aaKnown RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 ZNF140P52738 457 aaPredicted RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 GTF2H3Q13889 308 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 HLTFQ14527 1009 aaKnown RBP eCLIP18.73■□□□□ 0.59
SYF2-203ENST00000474160 ATP13A5Q4VNC0 1218 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 CERCAMQ5T4B2 595 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 NYAP1Q6ZVC0 841 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 ADGRG6Q86SQ4 1221 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 DCBLD1Q8N8Z6 715 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 AVL9Q8NBF6 648 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 DDHD1Q8NEL9 900 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 OR4K2Q8NGD2 314 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 CCL4L1Q8NHW4 92 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 ACTRT1Q8TDG2 376 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 ZDHHC1Q8WTX9 485 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 HEXDCQ8WVB3 486 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 DEPDC7Q96QD5 511 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 TIMM29Q9BSF4 260 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 TMEM121BQ9BXQ6 578 aaPredicted RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 EIF2B3Q9NR50 452 aaKnown RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 RAB6BQ9NRW1 208 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 TRMT1Q9NXH9 659 aaKnown RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 SNX12Q9UMY4 172 aa18.73■□□□□ 0.59
SYF2-203ENST00000474160 TPRP12270 2363 aaKnown RBP18.73■□□□□ 0.59
SYF2-203ENST00000474160 AGAP14A8MT82 685 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 KMOO15229 486 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 LDB2O43679 373 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 USP12O75317 370 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 CDK14O94921 469 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 MT-CO3P00414 261 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ZNF8P17098 575 aaPredicted RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 TCP1P17987 556 aaKnown RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 SPINK2P20155 84 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 PSMA3P25788 255 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ACTR1BP42025 376 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 LMAN1P49257 510 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ACTR1AP61163 376 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 CDK16Q00536 496 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 SPARCL1Q14515 664 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 CYP1B1Q16678 543 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 CLPPQ16740 277 aaPredicted RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 FAM151BQ6UXP7 276 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 UNQ6494/PRO21346Q6UXR6 183 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 MARK2Q7KZI7 788 aaKnown RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 GSTA5Q7RTV2 222 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 LRRTM4Q86VH4 590 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 PRELID2Q8N945 189 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ZNF398Q8TD17 642 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 STYXQ8WUJ0 223 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 PTCD2Q8WV60 388 aaKnown RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 PEX13Q92968 403 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ULK4Q96C45 1275 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ZNF514Q96K75 400 aaPredicted RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 TTC25Q96NG3 672 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 OSBPL9Q96SU4 736 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 OR2AG1Q9H205 316 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 SIRPGQ9P1W8 387 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 RIMKLBQ9ULI2 386 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 DNMT3AQ9Y6K1 912 aaPredicted RBP18.72■□□□□ 0.59
SYF2-203ENST00000474160 CEP295Q9C0D2 2601 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 ACACBO00763 2458 aa18.72■□□□□ 0.59
SYF2-203ENST00000474160 GOLGA6L10A0A0M3HER8 536 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 OR5K4A6NMS3 321 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 B4DGG1 531 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 GAPDHSO14556 408 aaPredicted RBP18.71■□□□□ 0.59
SYF2-203ENST00000474160 SRP72O76094 671 aaKnown RBP18.71■□□□□ 0.59
SYF2-203ENST00000474160 PRAMEF1O95521 474 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 AK4P27144 223 aaPredicted RBP18.71■□□□□ 0.59
SYF2-203ENST00000474160 GPR3P46089 330 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 TMEM115Q12893 351 aaPredicted RBP18.71■□□□□ 0.59
SYF2-203ENST00000474160 OLIG2Q13516 323 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 NR1D2Q14995 579 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 CHRNA6Q15825 494 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 GPR33Q49SQ1 333 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 ARMC3Q5W041 872 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 SLC30A9Q6PML9 568 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 ZNF438Q7Z4V0 828 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 DNAAF3Q8N9W5 541 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 GDAP1Q8TB36 358 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 CCDC3Q9BQI4 270 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 NRSN2Q9GZP1 204 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 SPATS2LQ9NUQ6 558 aaKnown RBP18.71■□□□□ 0.59
SYF2-203ENST00000474160 DKK4Q9UBT3 224 aa18.71■□□□□ 0.59
SYF2-203ENST00000474160 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.7■□□□□ 0.58
SYF2-203ENST00000474160 PROS1P07225 676 aa18.7■□□□□ 0.58
SYF2-203ENST00000474160 VCLP18206 1134 aa18.7■□□□□ 0.58
SYF2-203ENST00000474160 ITGALP20701 1170 aa18.7■□□□□ 0.58
SYF2-203ENST00000474160 RPL22P35268 128 aaKnown RBP18.7■□□□□ 0.58
SYF2-203ENST00000474160 NFATC2Q13469 925 aa18.7■□□□□ 0.58
SYF2-203ENST00000474160 CAMK2BQ13554 666 aa18.7■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms