RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 C4orf33Q8N1A6 199 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 NXPE1Q8N323 547 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 DCLK2Q8N568 766 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 OR2T34Q8NGX1 318 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ARL8AQ96BM9 186 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 COQ10AQ96MF6 247 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 UHRF1Q96T88 793 aaPredicted RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 GPR22Q99680 433 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ABCG8Q9H221 673 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 CHRDQ9H2X0 955 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 SNX15Q9NRS6 342 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ZDHHC3Q9NYG2 299 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 MARCH4Q9P2E8 410 aaPredicted RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 TRMT6Q9UJA5 497 aaKnown RBP10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 MID2Q9UJV3 735 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 CYP8B1Q9UNU6 501 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 ANKRD6Q9Y2G4 727 aa10.2□□□□□ -0.78
PRPF38A-202ENST00000474048 A0A087X1B8 175 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 IGLON5A6NGN9 336 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 H3BQF6 201 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 GOLGA8RI6L899 631 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 POLR3GO15318 223 aaPredicted RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 DCXO43602 365 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 GLRA3O75311 464 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 ZWINTO95229 277 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 ASMTLO95671 621 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SEMA4FO95754 770 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 S1PR4O95977 384 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 FTH1P02794 183 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 PYGBP11216 843 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 PKMP14618 531 aaKnown RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 UGT1A6P19224 532 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 UGT1A1P22309 533 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 UGT1A4P22310 534 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 AKT2P31751 481 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 UGT1A3P35503 534 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 UGT1A5P35504 534 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 CXCL12P48061 93 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 TPMTP51580 245 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 RAB10P61026 200 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 DBN1Q16643 649 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 MAP7D1Q3KQU3 841 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 TTLL9Q3SXZ7 439 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 ATP13A5Q4VNC0 1218 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SYTL3Q4VX76 610 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 HENMT1Q5T8I9 393 aaKnown RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 HECTD2Q5U5R9 776 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 HHATQ5VTY9 493 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 CNSTQ6PJW8 725 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 LCA5Q86VQ0 697 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 CAMKK1Q8N5S9 505 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 ANKRD42Q8N9B4 389 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 DTX3LQ8TDB6 740 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SNX19Q92543 992 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SCAMP4Q969E2 229 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 GLYATL1Q969I3 302 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 TLCD1Q96CP7 247 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 APOPT1Q96IL0 206 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SCYL1Q96KG9 808 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 VPS35Q96QK1 796 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 NDNQ99608 321 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 KLF6Q99612 283 aaPredicted RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 PAIP2Q9BPZ3 127 aaKnown RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SYTL2Q9HCH5 934 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 GPAMQ9HCL2 828 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SSU72Q9NP77 194 aaKnown RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SARS2Q9NP81 518 aaKnown RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 PHPT1Q9NRX4 125 aaPredicted RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SPATA6Q9NWH7 488 aaPredicted RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SMOXQ9NWM0 555 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 SERGEFQ9UGK8 458 aa10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 MTO1Q9Y2Z2 717 aaKnown RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 MTF2Q9Y483 593 aaPredicted RBP10.19□□□□□ -0.78
PRPF38A-202ENST00000474048 A0A096LPK6 155 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 CACNB4O00305 520 aaPredicted RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 FPGTO14772 594 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 KPNA5O15131 536 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 INPP4BO15327 924 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 MAP3K13O43283 966 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 MAGEC1O60732 1142 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 SPAG7O75391 227 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 FSBPO95073 299 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 DCNP07585 359 aaKnown RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 RPS3P23396 243 aaKnown RBP eCLIP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 CD6P30203 668 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 MAT2AP31153 395 aaKnown RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 NUDT1P36639 197 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 SKIV2L2P42285 1042 aaKnown RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 RGS4P49798 205 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 DPTQ07507 201 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 SEMA3AQ14563 771 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 FAM83EQ2M2I3 478 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 TSNAXIP1Q2TAA8 658 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 USP39Q53GS9 565 aaKnown RBP10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 GPRC6AQ5T6X5 926 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 AGAP9Q5VTM2 703 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 TIFABQ6ZNK6 161 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 TECPR1Q7Z6L1 1165 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 EXOC3L1Q86VI1 746 aa10.18□□□□□ -0.78
PRPF38A-202ENST00000474048 PHF6Q8IWS0 365 aaKnown RBP eCLIP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms