RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MOSPD3O75425 235 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 NUDT3O95989 172 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 EGFP01133 1207 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 ICAM1P05362 532 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 PRLRP16471 622 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 PTMSP20962 102 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 NR2F2P24468 414 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 PCGF2P35227 344 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 KRT2P35908 639 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 RPL3P39023 403 aaKnown RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 PTH2RP49190 550 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 MMP14P50281 582 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 SUOXP51687 545 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 PROK1P58294 105 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 MTX1Q13505 466 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 GPR18Q14330 331 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 MYLK3Q32MK0 819 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 C10orf25Q5T742 122 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 ZDHHC20Q5W0Z9 365 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 TPRG1Q6ZUI0 275 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 CCDC91Q7Z6B0 441 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 DNAJB7Q7Z6W7 309 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 LDB1Q86U70 411 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 AACSQ86V21 672 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 GPSM1Q86YR5 675 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 MAML2Q8IZL2 1156 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 TMCO5AQ8N6Q1 288 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 IQUBQ8NA54 791 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 FAM98AQ8NCA5 519 aaKnown RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 GOT1L1Q8NHS2 421 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 HM13Q8TCT9 377 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 PPP4R1Q8TF05 950 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 TEKT4Q8WW24 435 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 ATL1Q8WXF7 558 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 EGLN2Q96KS0 407 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 NEK1Q96PY6 1258 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 NAA11Q9BSU3 229 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 THUMPD3Q9BV44 507 aaKnown RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 ANKZF1Q9H8Y5 726 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 MBNL1Q9NR56 388 aaKnown RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 TUBA8Q9NY65 449 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 TAS2R14Q9NYV8 317 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 LARSQ9P2J5 1176 aaKnown RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 CRNNQ9UBG3 495 aaPredicted RBP4.24□□□□□ -1.73
BRCA1-212ENST00000473961 ZNF112Q9UJU3 913 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 COG5Q9UP83 839 aa4.24□□□□□ -1.73
BRCA1-212ENST00000473961 FLT1P17948 1338 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ATXN2Q99700 1313 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 GOLGA6L9A6NEM1 432 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 URADA6NGE7 173 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 KCNU1A8MYU2 1149 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ZNF814B7Z6K7 855 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 NDUFS4O43181 175 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 BCL10O95999 233 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CYP1A2P05177 515 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ATP5BP06576 529 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CYC1P08574 325 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ARSBP15848 533 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 PFKFB1P16118 471 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 NAGAP17050 411 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 GNLYP22749 145 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 HNRNPH1P31943 449 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 MMP13P45452 471 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 PLCD1P51178 756 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 SELENOVP59797 346 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 SRSF1Q07955 248 aaKnown RBP eCLIP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 DLG2Q15700 870 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CTF1Q16619 201 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 MEP1AQ16819 746 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 HYAL4Q2M3T9 481 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 DNTTIP2Q5QJE6 756 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CLEC17AQ6ZS10 378 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 YTHDF3Q7Z739 585 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CEP97Q8IW35 865 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 AADATQ8N5Z0 425 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ARFGAP1Q8N6T3 406 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ZBTB8BQ8NAP8 495 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CAMKVQ8NCB2 501 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ENGASEQ8NFI3 743 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 EXD1Q8NHP7 514 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CFAP61Q8NHU2 1237 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 PPP1R13BQ96KQ4 1090 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 FER1L6-AS2Q96M78 137 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 NLRP4Q96MN2 994 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 DDOQ99489 341 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 SLX1AQ9BQ83 275 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 MOV10L1Q9BXT6 1211 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 POLDIP3Q9BY77 421 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ISCUQ9H1K1 167 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 RAD21L1Q9H4I0 556 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 OPA3Q9H6K4 179 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 ESRP2Q9H6T0 727 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 C17orf75Q9HAS0 396 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 XAB2Q9HCS7 855 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CNGB3Q9NQW8 809 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 TRMT1Q9NXH9 659 aaKnown RBP4.23□□□□□ -1.73
BRCA1-212ENST00000473961 HAO2Q9NYQ3 351 aa4.23□□□□□ -1.73
BRCA1-212ENST00000473961 CDC14AQ9UNH5 594 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms