RNA–Protein interactions for RNA: ENST00000473066.5

MRPL55-226, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 820 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-226ENST00000473066 PACSIN2Q9UNF0 486 aaPredicted RBP15.45■□□□□ 0.06
MRPL55-226ENST00000473066 AAR2Q9Y312 384 aaKnown RBP15.45■□□□□ 0.06
MRPL55-226ENST00000473066 PKP3Q9Y446 797 aa15.45■□□□□ 0.06
MRPL55-226ENST00000473066 SPO11Q9Y5K1 396 aa15.45■□□□□ 0.06
MRPL55-226ENST00000473066 A0A1W2PQM1 296 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 GPR89AB7ZAQ6 455 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ARHGAP6O43182 974 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 GRID2O43424 1007 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 TLX3O43711 291 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 DXOO77932 396 aaKnown RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 GPR89BP0CG08 455 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 BPIP17213 487 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 PSMB4P28070 264 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 HMGCLP35914 325 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 SPAM1P38567 509 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 EIF3IQ13347 325 aaKnown RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 SLC1A5Q15758 541 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ANKRD20A2Q5SQ80 823 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ANKRD20A1Q5TYW2 823 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ANKRD20A3Q5VUR7 823 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 AADACL2Q6P093 401 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 C19orf48Q6RUI8 117 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ARHGEF18Q6ZSZ5 1173 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 SFTPA2Q8IWL1 248 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ARL14Q8N4G2 192 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 HNRNPLLQ8WVV9 542 aaKnown RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 PATE1Q8WXA2 126 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 LIN37Q96GY3 246 aaPredicted RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 SPATA13Q96N96 652 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ZCCHC2Q9C0B9 1178 aaKnown RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 OR2AG1Q9H205 316 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 TRIM39Q9HCM9 518 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 BPIFA1Q9NP55 256 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 ARFGAP3Q9NP61 516 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 CNOT6Q9ULM6 557 aaKnown RBP15.44■□□□□ 0.06
MRPL55-226ENST00000473066 GUCA1BQ9UMX6 200 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 PRKAB1Q9Y478 270 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 PLEKHM1Q9Y4G2 1056 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 CAPN6Q9Y6Q1 641 aa15.44■□□□□ 0.06
MRPL55-226ENST00000473066 A0A087WV48 116 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 NUAK1O60285 661 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 DNAJC6O75061 913 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ALDH4A1P30038 563 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 MLLT3P42568 568 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ERVPABLB-1P60509 514 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 INSCQ1MX18 579 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 COL28A1Q2UY09 1125 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 AMZ1Q400G9 498 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 C17orf82Q86X59 251 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-226ENST00000473066 NAGSQ8N159 534 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 AVL9Q8NBF6 648 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ZNF248Q8NDW4 579 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 UBE2Q2Q8WVN8 375 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 EID2BQ96D98 161 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 TTC25Q96NG3 672 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ALS2CR12Q96Q35 445 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 FOXP3Q9BZS1 431 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 OSGEPL1Q9H4B0 414 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 AKAP7Q9P0M2 348 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ATXN10Q9UBB4 475 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ATXN7L1Q9ULK2 861 aaPredicted RBP15.43■□□□□ 0.06
MRPL55-226ENST00000473066 KCNK6Q9Y257 313 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 PCDHGA8Q9Y5G5 932 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 ADGRG1Q9Y653 693 aa15.43■□□□□ 0.06
MRPL55-226ENST00000473066 A0A0U1RQJ8 604 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 AURKAO14965 403 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 STX7O15400 261 aaKnown RBP15.42■□□□□ 0.06
MRPL55-226ENST00000473066 DDX3YO15523 660 aaKnown RBP15.42■□□□□ 0.06
MRPL55-226ENST00000473066 VEGFDO43915 354 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 SNX2O60749 519 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 PPFIA2O75334 1257 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 CPNE6O95741 557 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 JMJD7P0C870 316 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 CCKBRP32239 447 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 EIF2S3P41091 472 aaKnown RBP15.42■□□□□ 0.06
MRPL55-226ENST00000473066 GPR3P46089 330 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 PDX1P52945 283 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 CCDC173Q0VFZ6 552 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 ITGA9Q13797 1035 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 CLPPQ16740 277 aaPredicted RBP15.42■□□□□ 0.06
MRPL55-226ENST00000473066 PHF19Q5T6S3 580 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 IGF2-ASQ6U949 168 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 CRTC3Q6UUV7 619 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 RAB11FIP2Q7L804 512 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 ZNF438Q7Z4V0 828 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 B3GNT8Q7Z7M8 397 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 PIM3Q86V86 326 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 LRRTM4Q86VH4 590 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 FBXO39Q8N4B4 442 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 TTC30BQ8N4P2 665 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 CCDC110Q8TBZ0 833 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 SLC37A2Q8TED4 501 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 HES6Q96HZ4 224 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 VPS35Q96QK1 796 aa15.42■□□□□ 0.06
MRPL55-226ENST00000473066 GLYATL1P3A0A0U1RQE8 302 aa15.41■□□□□ 0.06
MRPL55-226ENST00000473066 C2orf81A6NN90 581 aa15.41■□□□□ 0.06
MRPL55-226ENST00000473066 PLD2O14939 933 aa15.41■□□□□ 0.06
MRPL55-226ENST00000473066 KMOO15229 486 aa15.41■□□□□ 0.06
MRPL55-226ENST00000473066 CASC3O15234 703 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms