RNA–Protein interactions for RNA: ENST00000471538.1

SPEN-204, Transcript of spen family transcriptional repressor, humanhuman

TSL 2

Gene SPEN, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-204ENST00000471538 TMEM169Q96HH4 297 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 SLC30A3Q99726 388 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 FEM1AQ9BSK4 669 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 LRRC3Q9BY71 257 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 MUC3BQ9H195 1237 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 P2RY12Q9H244 342 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 MTIF3Q9H2K0 278 aaKnown RBP6.38□□□□□ -1.39
SPEN-204ENST00000471538 ZNF576Q9H609 170 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 SYTL2Q9HCH5 934 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 PRDM9Q9NQV7 894 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 MRGBPQ9NV56 204 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 NDE1Q9NXR1 346 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 UTP6Q9NYH9 597 aaKnown RBP6.38□□□□□ -1.39
SPEN-204ENST00000471538 VPS51Q9UID3 782 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 FKBPLQ9UIM3 349 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 G3BP2Q9UN86 482 aaKnown RBP6.38□□□□□ -1.39
SPEN-204ENST00000471538 LRCH1Q9Y2L9 728 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 PCDHGC4Q9Y5F7 938 aa6.38□□□□□ -1.39
SPEN-204ENST00000471538 ABHD14A-ACY1A0A1B0GW23 586 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 LRRC14BA6NHZ5 514 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 STX16-NPEPL1H3BU86 382 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 FBP2O00757 339 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 GAPDHSO14556 408 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 STX16O14662 325 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 AIM2O14862 343 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CASQ2O14958 399 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 TEX28O15482 410 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SMNDC1O75940 238 aaKnown RBP eCLIP6.37□□□□□ -1.39
SPEN-204ENST00000471538 RHOBTB1O94844 696 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SUPT7LO94864 414 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SIX3O95343 332 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 PRAMEF12O95522 483 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 URODP06132 367 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ALDOCP09972 364 aaKnown RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 PKMP14618 531 aaKnown RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 TSPAN8P19075 237 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 PMLP29590 882 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 FMO4P31512 558 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 MC4RP32245 332 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ERFP50548 548 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 THOP1P52888 689 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 EPHB3P54753 998 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ATP6V0D1P61421 351 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SH3BP2P78314 561 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SLC7A9P82251 487 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 FPGSQ05932 587 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CDC16Q13042 620 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CEACAM7Q14002 265 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 LRP8Q14114 963 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CCDC85BQ15834 202 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 CDKN3Q16667 212 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 TCHHL1Q5QJ38 904 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 NXNQ6DKJ4 435 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CLEC6AQ6EIG7 209 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 PSRC1Q6PGN9 363 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 BNC2Q6ZN30 1099 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 DHDDSQ86SQ9 333 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CLYBLQ8N0X4 340 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CPXM2Q8N436 756 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CARNMT1Q8N4J0 409 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ARL14EPQ8N8R7 260 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 STAG3L4Q8TBR4 150 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CD200R1Q8TD46 325 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ZNF483Q8TF39 744 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 PIH1D2Q8WWB5 315 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 PYDC1Q8WXC3 89 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 AUTS2Q8WXX7 1259 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 FUBP1Q96AE4 644 aaKnown RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 CCDC124Q96CT7 223 aaKnown RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 C19orf60Q96EN9 201 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 LMLNQ96KR4 655 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 C3orf30Q96M34 536 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 NSUN5Q96P11 429 aaKnown RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 CYP2S1Q96SQ9 504 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ZNF184Q99676 751 aaPredicted RBP6.37□□□□□ -1.39
SPEN-204ENST00000471538 GPR21Q99679 349 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 C19orf43Q9BQ61 176 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ADGRE3Q9BY15 652 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ZBP1Q9H171 429 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 TUBB1Q9H4B7 451 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 EPHX3Q9H6B9 360 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 WDR41Q9HAD4 459 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 EFCAB1Q9HAE3 211 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SMPD4Q9NXE4 827 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ZDHHC7Q9NXF8 308 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 TAS2R13Q9NYV9 303 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 SPG21Q9NZD8 308 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 HACD3Q9P035 362 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 IL17CQ9P0M4 197 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 THEGQ9P2T0 379 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 GALPQ9UBC7 116 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ADAMTS6Q9UKP5 1117 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 ZNF711Q9Y462 761 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 DNAJC15Q9Y5T4 150 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 CPQQ9Y646 472 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 TRIOO75962 3097 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 USP34Q70CQ2 3546 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 BRWD1Q9NSI6 2320 aa6.37□□□□□ -1.39
SPEN-204ENST00000471538 HELZP42694 1942 aaKnown RBP6.36□□□□□ -1.39
SPEN-204ENST00000471538 PRRC2BQ5JSZ5 2229 aaKnown RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms