RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 KLK10O43240 276 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 ASMTLO95671 621 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 GPR89BP0CG08 455 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 HOXB3P14651 431 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 UGT1A5P35504 534 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 ACTR1BP42025 376 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 VAV2P52735 878 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 MAZP56270 477 aaKnown RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 DCDC1P59894 354 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 ACTR1AP61163 376 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 CDK18Q07002 472 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 SQSTM1Q13501 440 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 SPA17Q15506 151 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 LONRF2Q1L5Z9 754 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 TFDP3Q5H9I0 405 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 PDPK2PQ6A1A2 396 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 CCDC70Q6NSX1 233 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 FOXR1Q6PIV2 292 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 DOK6Q6PKX4 331 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 MFSD7Q6UXD7 560 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 NPNTQ6UXI9 565 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 ZNF771Q7L3S4 317 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 HDXQ7Z353 690 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 KIAA1328Q86T90 577 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 SLITRK4Q8IW52 837 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 SFTPA2Q8IWL1 248 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 RCOR2Q8IZ40 523 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 TFB1MQ8WVM0 346 aaKnown RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 NAF1Q96HR8 494 aaKnown RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 PKNOX2Q96KN3 472 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 AGAP2Q99490 1192 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 VAT1Q99536 393 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 FUT8Q9BYC5 575 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 FOXP3Q9BZS1 431 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 VIPAS39Q9H9C1 493 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 PSD3Q9NYI0 1048 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 AKAP7Q9P0M2 348 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 NFKBIL1Q9UBC1 381 aaPredicted RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 CNOT6Q9ULM6 557 aaKnown RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 TMEM98Q9Y2Y6 226 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 REXO2Q9Y3B8 237 aaKnown RBP13.39□□□□□ -0.27
HMGN1-211ENST00000471260 ST14Q9Y5Y6 855 aa13.39□□□□□ -0.27
HMGN1-211ENST00000471260 SMG1Q96Q15 3661 aaKnown RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 HGSO14964 777 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ATXN7O15265 892 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 INPP4BO15327 924 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 B4GAT1O43505 415 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 CST8O60676 142 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 DNAJC6O75061 913 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 JMJD7P0C870 316 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ALDH4A1P30038 563 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 FASLGP48023 281 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 CXADRP78310 365 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 GPLD1P80108 840 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 TRA2AQ13595 282 aaKnown RBP eCLIP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 PRKD1Q15139 912 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 C11orf63Q6NUN7 778 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 SPOCD1Q6ZMY3 1216 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ZNF572Q7Z3I7 529 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 TMC3Q7Z5M5 1100 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 KATNAL2Q8IYT4 538 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 TRIM58Q8NG06 486 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 PTCD2Q8WV60 388 aaKnown RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 P3H4Q92791 437 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ZSCAN5AQ9BUG6 496 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 CARD9Q9H257 536 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 SUDS3Q9H7L9 328 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ANKZF1Q9H8Y5 726 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 GLOD4Q9HC38 313 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 SEPT10Q9P0V9 454 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ZNHIT2Q9UHR6 403 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ATXN7L1Q9ULK2 861 aaPredicted RBP13.38□□□□□ -0.27
HMGN1-211ENST00000471260 LOXL2Q9Y4K0 774 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 HYOU1Q9Y4L1 999 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 PCDHA13Q9Y5I0 950 aa13.38□□□□□ -0.27
HMGN1-211ENST00000471260 ITPR1Q14643 2758 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 PPM1DO15297 605 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 NDST3O95803 873 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 EPOP01588 193 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 SLC2A4P14672 509 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 PTPN3P26045 913 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 SLC5A2P31639 672 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 OR1D5P58170 312 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 DYNLT1P63172 113 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 RHDQ02161 417 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 VAC14Q08AM6 782 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 GALNT3Q14435 633 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 MARK2Q7KZI7 788 aaKnown RBP13.37□□□□□ -0.27
HMGN1-211ENST00000471260 LYSMD3Q7Z3D4 306 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 TRIM74Q86UV6 250 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 SFRP1Q8N474 314 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 TRAM1L1Q8N609 369 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 AVL9Q8NBF6 648 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 OR4D9Q8NGE8 314 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 EID2BQ96D98 161 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 WBP1Q96G27 269 aa13.37□□□□□ -0.27
HMGN1-211ENST00000471260 RBM41Q96IZ5 413 aaKnown RBP13.37□□□□□ -0.27
HMGN1-211ENST00000471260 BBC3Q96PG8 261 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms