RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 ING2Q9H160 280 aa18.74■□□□□ 0.59
NCKIPSD-209ENST00000470006 ZNF451Q9Y4E5 1061 aa18.74■□□□□ 0.59
NCKIPSD-209ENST00000470006 PCDHGA9Q9Y5G4 932 aaKnown RBP18.74■□□□□ 0.59
NCKIPSD-209ENST00000470006 LILRA5A6NI73 299 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 EIF3CLB5ME19 914 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 VIPP01282 170 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 LEPRP48357 1165 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 EPHB1P54762 984 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 RPS18P62269 152 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 RPS15P62841 145 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 PTSQ03393 145 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 CHRNA6Q15825 494 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 CACHD1Q5VU97 1274 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 JMJD6Q6NYC1 403 aaPredicted RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 TICAM1Q8IUC6 712 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 PGBD5Q8N414 524 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 SMIM14Q96QK8 99 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 MCCC1Q96RQ3 725 aaPredicted RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 EIF3CQ99613 913 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 ZNF768Q9H5H4 540 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 VPS18Q9P253 973 aa18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 ERRFI1Q9UJM3 462 aaPredicted RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 G3BP2Q9UN86 482 aaKnown RBP18.73■□□□□ 0.59
NCKIPSD-209ENST00000470006 TOX3O15405 576 aaPredicted RBP18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 DPM1O60762 260 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 FGF5P12034 268 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 PSMA2P25787 234 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 VARSP26640 1264 aaKnown RBP18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 ITKQ08881 620 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 UGT8Q16880 541 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 CYB5D1Q6P9G0 228 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 FAM92BQ6ZTR7 304 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 MON1BQ7L1V2 547 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 ZNF765Q7L2R6 523 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 C5orf34Q96MH7 638 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 PLEKHG4BQ96PX9 1271 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 RUFY1Q96T51 708 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 SNRNP25Q9BV90 132 aaKnown RBP18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 GANQ9H2C0 597 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 PDE7BQ9NP56 450 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 FAM207AQ9NSI2 230 aaPredicted RBP18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 OGFRQ9NZT2 677 aa18.72■□□□□ 0.59
NCKIPSD-209ENST00000470006 KIF1CO43896 1103 aaKnown RBP18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 LDLRP01130 860 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 PDHA1P08559 390 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 PTPN4P29074 926 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 KLK7P49862 253 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 OGDHQ02218 1023 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 NR6A1Q15406 480 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 IRGCQ6NXR0 463 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 FAM199XQ6PEV8 388 aaPredicted RBP18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 TMEM26Q6ZUK4 368 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 NLRP8Q86W28 1048 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 PIH1D2Q8WWB5 315 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 TCTN2Q96GX1 697 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 MGME1Q9BQP7 344 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 GPR87Q9BY21 358 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 BRD8Q9H0E9 1235 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 RMI1Q9H9A7 625 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 KLC4Q9NSK0 619 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 TAB2Q9NYJ8 693 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 SLC30A1Q9Y6M5 507 aa18.71■□□□□ 0.59
NCKIPSD-209ENST00000470006 GRID2O43424 1007 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 PRPSAP2O60256 369 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 ZNF30P17039 623 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 MMP13P45452 471 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 UBE2IP63279 158 aaKnown RBP18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 PDE1BQ01064 536 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 RALGPS1Q5JS13 557 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 MARC1Q5VT66 337 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 C1QL3Q5VWW1 255 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 SYVN1Q86TM6 617 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 ZDHHC12Q96GR4 267 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 NT5MQ9NPB1 228 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 RARRES3Q9UL19 164 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 SLC5A6Q9Y289 635 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 PPIL1Q9Y3C6 166 aa18.7■□□□□ 0.58
NCKIPSD-209ENST00000470006 C2CD3Q4AC94 2353 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 TCRBV5S1A1TA0A578 114 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 GOLGA6L3A6NEY3 463 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 A6NL46 340 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 RNF8O76064 485 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 TIAF1O95411 115 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 POU3F2P20265 443 aaPredicted RBP18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 STC1P52823 247 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 RIPPLY3P57055 190 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 JAM2P57087 298 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 TUBB3Q13509 450 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 ELOAQ14241 798 aaKnown RBP18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 SEPT7Q16181 437 aaKnown RBP18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 PPP1R15BQ5SWA1 713 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 RHOT1Q8IXI2 618 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 ATPAF2Q8N5M1 289 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 SIDT2Q8NBJ9 832 aaKnown RBP18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 MOCOSQ96EN8 888 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 PCMTD1Q96MG8 357 aaPredicted RBP18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 PEBP4Q96S96 227 aa18.69■□□□□ 0.58
NCKIPSD-209ENST00000470006 ZWILCHQ9H900 591 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms