RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 FASNP49327 2511 aaKnown RBP18.9■□□□□ 0.62
COL7A1-207ENST00000467985 SOWAHDA6NJG2 315 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 EIF4E1BA6NMX2 242 aaKnown RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 BTNL10A8MVZ5 291 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 APOC4-APOC2K7ER74 178 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 NVLO15381 856 aaKnown RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 NUAK1O60285 661 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 SLC25A14O95258 325 aaPredicted RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 APOC2P02655 101 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 PIRTP0C851 137 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 NFKB1P19838 968 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 CD1CP29017 333 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 SLC5A2P31639 672 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 CTNNA1P35221 906 aaKnown RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 MARCKSL1P49006 195 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 GPLD1P80108 840 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 ADCY2Q08462 1091 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 LLGL1Q15334 1064 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 CCDC181Q5TID7 509 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 JAMLQ86YT9 394 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 PHYKPLQ8IUZ5 450 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 SFRP1Q8N474 314 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 AVL9Q8NBF6 648 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 LSM14AQ8ND56 463 aaKnown RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 KRT35Q92764 455 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 PLEKHG4BQ96PX9 1271 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 FCRL5Q96RD9 977 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 HERPUD2Q9BSE4 406 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 STN1Q9H668 368 aaKnown RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 TRIM39Q9HCM9 518 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 KCNK4Q9NYG8 393 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.89■□□□□ 0.61
COL7A1-207ENST00000467985 PISDQ9UG56 409 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 ACSL6Q9UKU0 697 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 TFR2Q9UP52 801 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 SSUH2Q9Y2M2 353 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 PCDHA3Q9Y5H8 950 aa18.89■□□□□ 0.61
COL7A1-207ENST00000467985 GCN1Q92616 2671 aaKnown RBP18.88■□□□□ 0.61
COL7A1-207ENST00000467985 LOC285095A0A1B0GVY8 99 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 CCDC66A2RUB6 948 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 HGSO14964 777 aaPredicted RBP18.88■□□□□ 0.61
COL7A1-207ENST00000467985 PPM1DO15297 605 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 GRID2O43424 1007 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 NRDCO43847 1150 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 SLC4A1P02730 911 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 HOXB3P14651 431 aaPredicted RBP18.88■□□□□ 0.61
COL7A1-207ENST00000467985 CD68P34810 354 aaPredicted RBP18.88■□□□□ 0.61
COL7A1-207ENST00000467985 HMGCLP35914 325 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 NAP1L1P55209 391 aaKnown RBP18.88■□□□□ 0.61
COL7A1-207ENST00000467985 WNT3AP56704 352 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 TRA2AQ13595 282 aaKnown RBP eCLIP18.88■□□□□ 0.61
COL7A1-207ENST00000467985 ZDHHC20Q5W0Z9 365 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 ALS2CLQ60I27 953 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 KDELC1Q6UW63 502 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 USP53Q70EK8 1073 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 PID1Q7Z2X4 250 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 TMPRSS9Q7Z410 1059 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 OR4D9Q8NGE8 314 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 SLC37A2Q8TED4 501 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 GLYATL1Q969I3 302 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 B3GNT4Q9C0J1 378 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 SEMA6CQ9H3T2 930 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 RDH14Q9HBH5 336 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 UBP1Q9NZI7 540 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 HACD3Q9P035 362 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 PRKAB1Q9Y478 270 aa18.88■□□□□ 0.61
COL7A1-207ENST00000467985 IGHV1OR21-1A0A087WYE8 117 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 TK2O00142 265 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 ACP5P13686 325 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 HGFP14210 728 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 PTPN7P35236 360 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 CETN2P41208 172 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 CLCNKAP51800 687 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 MPP3Q13368 585 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 FAM182AQ5T1J6 154 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 ZNF567Q8N184 647 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 TXLNBQ8N3L3 684 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 AHCTF1Q8WYP5 2266 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 SH3KBP1Q96B97 665 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 HAUS1Q96CS2 278 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 SLC38A3Q99624 504 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 NUDT22Q9BRQ3 303 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 HEMGNQ9BXL5 484 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 OR2AG1Q9H205 316 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 SARS2Q9NP81 518 aaKnown RBP18.87■□□□□ 0.61
COL7A1-207ENST00000467985 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.87■□□□□ 0.61
COL7A1-207ENST00000467985 ATXN10Q9UBB4 475 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 TBC1D29Q9UFV1 150 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 SPO11Q9Y5K1 396 aa18.87■□□□□ 0.61
COL7A1-207ENST00000467985 SCN8AQ9UQD0 1980 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 BAHCC1Q9P281 2608 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 KIR2DS5A0A0G2JLQ3 304 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 A0A0G2JNG1 304 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 IGHV5-10-1A0A0J9YXX1 117 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 RCCD1A6NED2 376 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 OR5K4A6NMS3 321 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 H7C0C1 242 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 KIR2DS3K7RE56 304 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 CHUKO15111 745 aa18.86■□□□□ 0.61
COL7A1-207ENST00000467985 ATXN7O15265 892 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms