RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 CSNK1DP48730 415 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 NDUFA8P51970 172 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 UBE2IP63279 158 aaKnown RBP10.09□□□□□ -0.79
HDAC3-203ENST00000467533 ACY1Q03154 408 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 GPS2Q13227 327 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 ZNF235Q14590 738 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 KCNAB1Q14722 419 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 MYBPC3Q14896 1274 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 C15orf59Q2T9L4 293 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-203ENST00000467533 IGFL3Q6UXB1 125 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 ADAMTSL4Q6UY14 1074 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 Q6ZS92 163 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 TMEM26Q6ZUK4 368 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 MRGPRGQ86SM5 289 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 RAB43Q86YS6 212 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 ZBTB2Q8N680 514 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 EMC1Q8N766 993 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 TMEM35BQ8NCS4 154 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 RSC1A1Q92681 617 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 ZDHHC12Q96GR4 267 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 CEP63Q96MT8 703 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 UCK1Q9HA47 277 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 METTL5Q9NRN9 209 aaKnown RBP10.09□□□□□ -0.79
HDAC3-203ENST00000467533 RMND1Q9NWS8 449 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 CFAP45Q9UL16 551 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 NOVA2Q9UNW9 492 aaKnown RBP10.09□□□□□ -0.79
HDAC3-203ENST00000467533 PCYT1BQ9Y5K3 369 aaPredicted RBP10.09□□□□□ -0.79
HDAC3-203ENST00000467533 SLC30A1Q9Y6M5 507 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 ZGRF1Q86YA3 2104 aa10.09□□□□□ -0.79
HDAC3-203ENST00000467533 PIKFYVEQ9Y2I7 2098 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 TRAFD1O14545 582 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-203ENST00000467533 PALMO75781 387 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 VIPP01282 170 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 RAB40ALP0C0E4 278 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 EBLN1P0CF75 366 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 TNFAIP3P21580 790 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 OTX2P32243 289 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 ARL4DP49703 201 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 SCNN1BP51168 640 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 ART1P52961 327 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 DPTQ07507 201 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 C2CD6Q53TS8 623 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 KRBA2Q6ZNG9 492 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 PHYKPLQ8IUZ5 450 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF808Q8N4W9 903 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-203ENST00000467533 CCDC185Q8N715 623 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 CLEC1AQ8NC01 280 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 CHTF18Q8WVB6 975 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 FAR1Q8WVX9 515 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 AP2M1Q96CW1 435 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF514Q96K75 400 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-203ENST00000467533 FAM81BQ96LP2 452 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 PLEKHG4BQ96PX9 1271 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 WDR77Q9BQA1 342 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-203ENST00000467533 SCAND2PQ9GZW5 306 aaPredicted RBP10.08□□□□□ -0.8
HDAC3-203ENST00000467533 OSGEPL1Q9H4B0 414 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 FGF21Q9NSA1 209 aa10.08□□□□□ -0.8
HDAC3-203ENST00000467533 MDC1Q14676 2089 aaKnown RBP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 NPIPB15A6NHN6 443 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 PRAMEF11O60813 436 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 DNAJC6O75061 913 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 ATP1A1P05023 1023 aaKnown RBP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 SDC4P31431 198 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 CA5AP35218 305 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 GABRB2P47870 512 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 GSDMDP57764 484 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 AP1S1P61966 158 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 CDC16Q13042 620 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF658Q5TYW1 1059 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 TSPAN33Q86UF1 283 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 BPHLQ86WA6 291 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 PYROXD2Q8N2H3 581 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 GALNT16Q8N428 558 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 TTC30BQ8N4P2 665 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 MSANTD4Q8NCY6 345 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 UBXN4Q92575 508 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 RELTQ969Z4 430 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 CCDC120Q96HB5 630 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 NLNQ9BYT8 704 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 ABCG8Q9H221 673 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 ZNF552Q9H707 407 aaPredicted RBP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 CATSPERBQ9H7T0 1116 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 VPS18Q9P253 973 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 TMEM59LQ9UK28 342 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.07□□□□□ -0.8
HDAC3-203ENST00000467533 CSAG2Q9Y5P2 127 aa10.07□□□□□ -0.8
HDAC3-203ENST00000467533 IGHV5-51A0A0C4DH38 117 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.06□□□□□ -0.8
HDAC3-203ENST00000467533 A0A1W2PQ67 120 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 A0A1W2PQJ5 194 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 WASH4PA8MWX3 477 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 CREB3O43889 395 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 F13A1P00488 732 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 PYGLP06737 847 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 KCNK10P57789 538 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 PPP1CAP62136 330 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 TLE4Q04727 773 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 HIF1AQ16665 826 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 COBLL1Q53SF7 1204 aa10.06□□□□□ -0.8
HDAC3-203ENST00000467533 ATL3Q6DD88 541 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms