RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 ITSN1Q15811 1721 aa3.53□□□□□ -1.85
XRN1-206ENST00000467077 SBNO1A3KN83 1393 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ROCK1Q13464 1354 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 PLEKHH1Q9ULM0 1364 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ADGRF5Q8IZF2 1346 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 C17orf113A0A1B0GUU1 675 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 CBY3A6NI87 242 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 NR5A2O00482 541 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 PER2O15055 1255 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 CEP104O60308 925 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 PIP5K1CO60331 668 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ZIC3O60481 467 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 USP8P40818 1118 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 HALP42357 657 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 HOXA1P49639 335 aaPredicted RBP3.52□□□□□ -1.85
XRN1-206ENST00000467077 BLKP51451 505 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 MAP3K21Q5TCX8 1036 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 C17orf99Q6UX52 265 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 KRBA2Q6ZNG9 492 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 C15orf39Q6ZRI6 1047 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 KCTD8Q6ZWB6 473 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 NOTCH2NLQ7Z3S9 236 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP3.52□□□□□ -1.85
XRN1-206ENST00000467077 CPXM2Q8N436 756 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 WDR20Q8TBZ3 569 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ZNF354BQ96LW1 612 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 CD180Q99467 661 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 HERPUD2Q9BSE4 406 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 TRIM51Q9BSJ1 452 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 TAOK3Q9H2K8 898 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 SLC32A1Q9H598 525 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ERVMER34-1Q9H9K5 563 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ZDHHC18Q9NUE0 388 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 HCFC1R1Q9NWW0 138 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 ALKBH4Q9NXW9 302 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 RALYQ9UKM9 306 aaKnown RBP3.52□□□□□ -1.85
XRN1-206ENST00000467077 GPR52Q9Y2T5 361 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 DLC1Q96QB1 1528 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 RGPD5Q99666 1765 aa3.52□□□□□ -1.85
XRN1-206ENST00000467077 COL5A2P05997 1499 aaPredicted RBP3.52□□□□□ -1.85
XRN1-206ENST00000467077 RRBP1Q9P2E9 1410 aaKnown RBP3.52□□□□□ -1.85
XRN1-206ENST00000467077 RPGRIP1LQ68CZ1 1315 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 PEAK1Q9H792 1746 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 ARHGAP10A1A4S6 786 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 PABPN1LA6NDY0 278 aaKnown RBP3.51□□□□□ -1.85
XRN1-206ENST00000467077 WNT9BO14905 357 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 SORBS2O94875 1100 aaKnown RBP3.51□□□□□ -1.85
XRN1-206ENST00000467077 HLA-DOBP13765 273 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 RYKP34925 604 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 HDAC4P56524 1084 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 GNB1P62873 340 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 MRPS5P82675 430 aaKnown RBP3.51□□□□□ -1.85
XRN1-206ENST00000467077 DHX8Q14562 1220 aaKnown RBP3.51□□□□□ -1.85
XRN1-206ENST00000467077 NAA25Q14CX7 972 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 UGP2Q16851 508 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 EDRF1Q3B7T1 1238 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 SLC27A1Q6PCB7 646 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 METTL7BQ6UX53 244 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 BBS12Q6ZW61 710 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 MOB3CQ70IA8 216 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 KMT5CQ86Y97 462 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 LURAP1LQ8IV03 231 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 LSM14AQ8ND56 463 aaKnown RBP3.51□□□□□ -1.85
XRN1-206ENST00000467077 TRIM63Q969Q1 353 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 CDCA5Q96FF9 252 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 POLR3GLQ9BT43 218 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 CHMP4AQ9BY43 222 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 CSTL1Q9H114 145 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 NDRG3Q9UGV2 375 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 PRO0461Q9UI25 63 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 PCDHGB5Q9Y5G0 923 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 TOPAZ1Q8N9V7 1692 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 TECPR2O15040 1411 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 LRRC37A3O60309 1634 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 GPRASP1Q5JY77 1395 aa3.51□□□□□ -1.85
XRN1-206ENST00000467077 SHANK3Q9BYB0 1731 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 TYW5A2RUC4 315 aaKnown RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 PSMD14O00487 310 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 SOCS6O14544 535 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ATP2C2O75185 946 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 DPEP1P16444 411 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ZNF8P17098 575 aaPredicted RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 SRD5A1P18405 259 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 YWHAZP63104 245 aaKnown RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 PPFIA1Q13136 1202 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ZFP69Q49AA0 526 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 WDR45BQ5MNZ6 344 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 WDR73Q6P4I2 378 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ZNF852Q6ZMS4 543 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 TM9SF4Q92544 642 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 TAAR8Q969N4 342 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ZSCAN31Q96LW9 406 aaPredicted RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 VGLL1Q99990 258 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 SYT17Q9BSW7 474 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 PHF7Q9BWX1 381 aaPredicted RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 FKRPQ9H9S5 495 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 C1RLQ9NZP8 487 aa3.5□□□□□ -1.85
XRN1-206ENST00000467077 ZNF624Q9P2J8 865 aaPredicted RBP3.5□□□□□ -1.85
XRN1-206ENST00000467077 CDC14AQ9UNH5 594 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms