RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, human

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ITGB1-208	ENST00000464001	ZSCAN2	Q7Z7L9	614 aa	Predicted RBP	4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	TADA2B	Q86TJ2	420 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	RPAIN	Q86UA6	219 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	GPAT4	Q86UL3	456 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	LCA5	Q86VQ0	697 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	KMT5C	Q86Y97	462 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	CEP97	Q8IW35	865 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	CHERP	Q8IWX8	916 aa	Known RBP	4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	ODF3L1	Q8IXM7	274 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	AVL9	Q8NBF6	648 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	TNIP2	Q8NFZ5	429 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	GOT1L1	Q8NHS2	421 aa	Predicted RBP	4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	RND1	Q92730	232 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	EYA3	Q99504	573 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	NCAPG	Q9BPX3	1015 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	HAUS8	Q9BT25	410 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	GPR63	Q9BZJ6	419 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	SNTG1	Q9NSN8	517 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	KIAA1456	Q9P272	454 aa		4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	RALY	Q9UKM9	306 aa	Known RBP	4.05	□□□□□ -1.76
ITGB1-208	ENST00000464001	SNED1	Q8TER0	1413 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TDRD9	Q8NDG6	1382 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	GOLGA6L9	A6NEM1	432 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	ANTXRL	A6NF34	631 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	AP3D1	O14617	1153 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	SLC7A4	O43246	635 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	ERAL1	O75616	437 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	PGM3	O95394	542 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	HLA-DOB	P13765	273 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	DDX5	P17844	614 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	CHM	P24386	653 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	HPD	P32754	393 aa	Predicted RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	ACSL1	P33121	698 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	GNL1	P36915	607 aa	Predicted RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	GPD2	P43304	727 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	HSD17B7	P56937	341 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	WTAP	Q15007	396 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	CCDC158	Q5M9N0	1113 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	LRRC8E	Q6NSJ5	796 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	RGMB	Q6NW40	437 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	CPLX2	Q6PUV4	134 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	GFRAL	Q6UXV0	394 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TMTC3	Q6ZXV5	915 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	MTSS1L	Q765P7	747 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	NOXA1	Q86UR1	476 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	WDR63	Q8IWG1	891 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	ZCCHC9	Q8N567	271 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TEX9	Q8N6V9	391 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	C11orf65	Q8NCR3	313 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	BEST2	Q8NFU1	509 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	CENPT	Q96BT3	561 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	CNDP2	Q96KP4	475 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	SPATA17	Q96L03	361 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	OR10A4	Q9H209	315 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	ZNF696	Q9H7X3	374 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	FKRP	Q9H9S5	495 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	XAB2	Q9HCS7	855 aa	Known RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	MKKS	Q9NPJ1	570 aa	Predicted RBP	4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	PDRG1	Q9NUG6	133 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TMEM30A	Q9NV96	361 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	MTRR	Q9UBK8	725 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TBK1	Q9UHD2	729 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	TINAG	Q9UJW2	476 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	AMDHD2	Q9Y303	409 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	MMP24	Q9Y5R2	645 aa		4.04	□□□□□ -1.76
ITGB1-208	ENST00000464001	GOLGA6L10	A0A0M3HER8	536 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	CCDC196	A0A1B0GTZ2	297 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	TMEM63A	O94886	807 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	SLC4A1	P02730	911 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	MT-ND3	P03897	115 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	AGA	P20933	346 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	POU1F1	P28069	291 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	ABCD3	P28288	659 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	ABCD1	P33897	745 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	LINC01547	P58512	204 aa	Predicted RBP	4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	CREB5	Q02930	508 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	EIF4A2	Q14240	407 aa	Known RBP	4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	MAP3K21	Q5TCX8	1036 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	IL27RA	Q6UWB1	636 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	UNC5D	Q6UXZ4	953 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	SLC36A4	Q6YBV0	504 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	BBS12	Q6ZW61	710 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	MCM10	Q7L590	875 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	LINGO2	Q7L985	606 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	CATSPER4	Q7RTX7	472 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	TMEM219	Q86XT9	240 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	ERC1	Q8IUD2	1116 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	FOXRED2	Q8IWF2	684 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	RNF113B	Q8IZP6	322 aa	Known RBP	4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	LSM14A	Q8ND56	463 aa	Known RBP	4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	BBS10	Q8TAM1	723 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	SLC20A1	Q8WUM9	679 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	RUFY2	Q8WXA3	655 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	ABTB1	Q969K4	478 aa	Predicted RBP	4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	RNF125	Q96EQ8	232 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	BBS4	Q96RK4	519 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	REEP2	Q9BRK0	252 aa		4.03	□□□□□ -1.76
ITGB1-208	ENST00000464001	LRRC1	Q9BTT6	524 aa		4.03	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms