RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 TRIM39Q9HCM9 518 aa18.77■□□□□ 0.6
LMNB1-204ENST00000463908 CYP4F12Q9HCS2 524 aa18.77■□□□□ 0.6
LMNB1-204ENST00000463908 ATXN10Q9UBB4 475 aa18.77■□□□□ 0.6
LMNB1-204ENST00000463908 APPL1Q9UKG1 709 aa18.77■□□□□ 0.6
LMNB1-204ENST00000463908 KMT2BQ9UMN6 2715 aaPredicted RBP18.77■□□□□ 0.59
LMNB1-204ENST00000463908 PRSS38A1L453 326 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 ZNF500O60304 480 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-204ENST00000463908 DNAJC6O75061 913 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 SEC31AO94979 1220 aaKnown RBP18.76■□□□□ 0.59
LMNB1-204ENST00000463908 RASGRP1O95267 797 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 PRAMEF1O95521 474 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 TNFP01375 233 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 MC4RP32245 332 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 CDKN1CP49918 316 aaPredicted RBP18.76■□□□□ 0.59
LMNB1-204ENST00000463908 ITGA8P53708 1063 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 HNRNPKP61978 463 aaKnown RBP eCLIP18.76■□□□□ 0.59
LMNB1-204ENST00000463908 C1orf61Q13536 156 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 FNBP1LQ5T0N5 605 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 DUPD1Q68J44 220 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 ADGRG6Q86SQ4 1221 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 PIP4P1Q86T03 277 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 HOOK3Q86VS8 718 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 HDAC10Q969S8 669 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 SIGLEC10Q96LC7 697 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 PWWP2AQ96N64 755 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 LRRC1Q9BTT6 524 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 ASB8Q9H765 288 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 XAB2Q9HCS7 855 aaKnown RBP18.76■□□□□ 0.59
LMNB1-204ENST00000463908 TREX1Q9NSU2 369 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 MOSPD1Q9UJG1 213 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 SUFUQ9UMX1 484 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 BTBD3Q9Y2F9 522 aa18.76■□□□□ 0.59
LMNB1-204ENST00000463908 TP53BP1Q12888 1972 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 CCDC162PA2VCL2 907 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 OR51F1A6NGY5 319 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 SDR42E2A6NKP2 422 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 YKT6O15498 198 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 SH3BP5O60239 455 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 MTX2O75431 263 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 ASMTLO95671 621 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 IVLP07476 585 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 CELA2BP08218 269 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 PRSS56P0CW18 603 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 NMBRP28336 390 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 NFATC2Q13469 925 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 LAMB3Q13751 1172 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 ITGA9Q13797 1035 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 PUM1Q14671 1186 aaKnown RBP eCLIP18.75■□□□□ 0.593e-22■□□□□ 8.3
LMNB1-204ENST00000463908 MORF4L2Q15014 288 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 SUZ12Q15022 739 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 TRADDQ15628 312 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 MSS51Q4VC12 460 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 PRRT3Q5FWE3 981 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 CES3Q6UWW8 571 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 MARK2Q7KZI7 788 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 NLRP9Q7RTR0 991 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 MMGT1Q8N4V1 131 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 NOA1Q8NC60 698 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 ZNF548Q8NEK5 533 aaPredicted RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 PPHLN1Q8NEY8 458 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 SNF8Q96H20 258 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 CAMK1GQ96NX5 476 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 TRIM56Q9BRZ2 755 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 LRRC61Q9BV99 259 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 SLC13A1Q9BZW2 595 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 TMEM168Q9H0V1 697 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 OR2AG1Q9H205 316 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 CARS2Q9HA77 564 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 APOBEC3BQ9UH17 382 aaKnown RBP18.75■□□□□ 0.59
LMNB1-204ENST00000463908 SOX13Q9UN79 622 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 PLEKHM1Q9Y4G2 1056 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 ST14Q9Y5Y6 855 aa18.75■□□□□ 0.59
LMNB1-204ENST00000463908 NUAK1O60285 661 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 ZNF8P17098 575 aaPredicted RBP18.74■□□□□ 0.59
LMNB1-204ENST00000463908 DEKP35659 375 aaKnown RBP18.74■□□□□ 0.59
LMNB1-204ENST00000463908 BLKP51451 505 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 TMEM115Q12893 351 aaPredicted RBP18.74■□□□□ 0.59
LMNB1-204ENST00000463908 PYCR3Q53H96 274 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 GPRC6AQ5T6X5 926 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 SNX20Q7Z614 316 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 PIANPQ8IYJ0 282 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 PNPLA1Q8N8W4 532 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 CCL4L1Q8NHW4 92 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 LMX1AQ8TE12 382 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 PEX13Q92968 403 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 MFSD3Q96ES6 412 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 DPH5Q9H2P9 285 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 MRM3Q9HC36 420 aaKnown RBP18.74■□□□□ 0.59
LMNB1-204ENST00000463908 SMOXQ9NWM0 555 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 DLL3Q9NYJ7 618 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 VPS18Q9P253 973 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 SPASTQ9UBP0 616 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 ANAPC5Q9UJX4 755 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 CSNK1G3Q9Y6M4 447 aa18.74■□□□□ 0.59
LMNB1-204ENST00000463908 ACACBO00763 2458 aa18.73■□□□□ 0.59
LMNB1-204ENST00000463908 TRBV5-4A0A0C4DH59 114 aa18.73■□□□□ 0.59
LMNB1-204ENST00000463908 ESPNB1AK53 854 aa18.73■□□□□ 0.59
LMNB1-204ENST00000463908 H3BM21 787 aa18.73■□□□□ 0.59
LMNB1-204ENST00000463908 TRIM38O00635 465 aa18.73■□□□□ 0.59
LMNB1-204ENST00000463908 AQP9O43315 295 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms