RNA–Protein interactions for RNA: ENST00000462542.5

PCCB-203, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3

Gene PCCB, Length 488 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-203ENST00000462542 DNPEPQ9ULA0 475 aa11.52□□□□□ -0.57
PCCB-203ENST00000462542 G3BP2Q9UN86 482 aaKnown RBP11.52□□□□□ -0.57
PCCB-203ENST00000462542 SRPK3Q9UPE1 567 aa11.52□□□□□ -0.57
PCCB-203ENST00000462542 HIVEP3Q5T1R4 2406 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 TNRC6AQ8NDV7 1962 aaKnown RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 SNX2O60749 519 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 RASSF9O75901 435 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 LPOP22079 712 aaPredicted RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 PTPN4P29074 926 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 GFERP55789 205 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 UBE2IP63279 158 aaKnown RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 SH3BP2P78314 561 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 TRAF2Q12933 501 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 MRPL49Q13405 166 aaKnown RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 SYCP1Q15431 976 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 C1QL3Q5VWW1 255 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 LRRC66Q68CR7 880 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 RFLNAQ6ZTI6 216 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 PRSS42Q7Z5A4 293 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 TRIM74Q86UV6 250 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 PHYKPLQ8IUZ5 450 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 NSMCE1Q8WV22 266 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 PNPLA2Q96AD5 504 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 MOCOSQ96EN8 888 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 TGM7Q96PF1 710 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 PLEKHG4BQ96PX9 1271 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 MGME1Q9BQP7 344 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 RIOK2Q9BVS4 552 aaKnown RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 ING2Q9H160 280 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 RCOR3Q9P2K3 495 aaPredicted RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 ERRFI1Q9UJM3 462 aaPredicted RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 KCNK6Q9Y257 313 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 FARSAQ9Y285 508 aaKnown RBP11.51□□□□□ -0.57
PCCB-203ENST00000462542 SLC5A6Q9Y289 635 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 PRKAB1Q9Y478 270 aa11.51□□□□□ -0.57
PCCB-203ENST00000462542 A0A0J9YYE9 177 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 GRID2O43424 1007 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 NUAK1O60285 661 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 CEACAM4O75871 244 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 PEX11BO96011 259 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 VIPP01282 170 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 TRBC1P01850 177 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 ATP1A1P05023 1023 aaKnown RBP11.5□□□□□ -0.57
PCCB-203ENST00000462542 ACP5P13686 325 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 TYRP1P17643 537 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 CTPS1P17812 591 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 POU3F2P20265 443 aaPredicted RBP11.5□□□□□ -0.57
PCCB-203ENST00000462542 STC1P52823 247 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 JAM2P57087 298 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 POLR2FP61218 127 aaKnown RBP11.5□□□□□ -0.57
PCCB-203ENST00000462542 PDE1BQ01064 536 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 PTPRRQ15256 657 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 MARC1Q5VT66 337 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 CACHD1Q5VU97 1274 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 MON1BQ7L1V2 547 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 RHOT1Q8IXI2 618 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 RBM12BQ8IXT5 1001 aaKnown RBP11.5□□□□□ -0.57
PCCB-203ENST00000462542 SRRM1Q8IYB3 904 aaKnown RBP11.5□□□□□ -0.57
PCCB-203ENST00000462542 PGBD5Q8N414 524 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 NPWQ8N729 165 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 FNIP1Q8TF40 1166 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 TCTN2Q96GX1 697 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 ELMO2Q96JJ3 720 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 C5orf34Q96MH7 638 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 AGAP2Q99490 1192 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 RAB33BQ9H082 229 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 CARD9Q9H257 536 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 GANQ9H2C0 597 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 GPATCH2LQ9NWQ4 482 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 OGFRQ9NZT2 677 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 TMEM63CQ9P1W3 806 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 MAP10Q9P2G4 905 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 EPHA6Q9UF33 1036 aa11.5□□□□□ -0.57
PCCB-203ENST00000462542 CNOT6Q9ULM6 557 aaKnown RBP11.5□□□□□ -0.57
PCCB-203ENST00000462542 SSU72P8A0A1W2PR75 194 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 RGSL1A5PLK6 1076 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 ARGFXA6NJG6 315 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 FZD6O60353 706 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 RNF8O76064 485 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 CBX6O95503 412 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 PDHA1P08559 390 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 NELFEP18615 380 aaKnown RBP11.49□□□□□ -0.57
PCCB-203ENST00000462542 TNFAIP3P21580 790 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 CES1P23141 567 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 EPHB1P54762 984 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 CDH6P55285 790 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 CA9Q16790 459 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 ZRANB3Q5FWF4 1079 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 PPP6R3Q5H9R7 873 aaPredicted RBP11.49□□□□□ -0.57
PCCB-203ENST00000462542 TRIM48Q8IWZ4 208 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 Q8NA96 180 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 KCTD15Q96SI1 283 aaPredicted RBP11.49□□□□□ -0.57
PCCB-203ENST00000462542 ZWILCHQ9H900 591 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 CWC15Q9P013 229 aaKnown RBP11.49□□□□□ -0.57
PCCB-203ENST00000462542 SEMA5BQ9P283 1151 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 RARRES3Q9UL19 164 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 PCYT1BQ9Y5K3 369 aaPredicted RBP11.49□□□□□ -0.57
PCCB-203ENST00000462542 SLC30A1Q9Y6M5 507 aa11.49□□□□□ -0.57
PCCB-203ENST00000462542 OTOGQ6ZRI0 2925 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms