RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 TM7SF3Q9NS93 570 aa11.02□□□□□ -0.64
APTX-209ENST00000460940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.02□□□□□ -0.64
APTX-209ENST00000460940 PKP3Q9Y446 797 aa11.02□□□□□ -0.64
APTX-209ENST00000460940 OR1A2Q9Y585 309 aa11.02□□□□□ -0.64
APTX-209ENST00000460940 SPTBN4Q9H254 2564 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 C2orf81A6NN90 581 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 CCDC188H7C350 402 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 K7ESM1 405 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 AP3B1O00203 1094 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 USP12O75317 370 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 ECEL1O95672 775 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 CRTAMO95727 393 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 SOD1P00441 154 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 SLC4A1P02730 911 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 CSF2P04141 144 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 APRTP07741 180 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 ZSCAN5DPP0CG00 497 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 GPR1P46091 355 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 BLKP51451 505 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 SEC24CP53992 1094 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 HNRNPKP61978 463 aaKnown RBP eCLIP11.02□□□□□ -0.65
APTX-209ENST00000460940 CDK16Q00536 496 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 CDH17Q12864 832 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 BLMHQ13867 455 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 SPARCL1Q14515 664 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 RSPO4Q2I0M5 234 aaPredicted RBP11.02□□□□□ -0.65
APTX-209ENST00000460940 UAP1L1Q3KQV9 507 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 C1QTNF12Q5T7M4 302 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 HEATR4Q86WZ0 1026 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 IFT20Q8IY31 132 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 BRSK1Q8TDC3 778 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 ZFAND2BQ8WV99 257 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 BTN2A2Q8WVV5 523 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 CCT6BQ92526 530 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 SCAMP4Q969E2 229 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 FUBP1Q96AE4 644 aaKnown RBP11.02□□□□□ -0.65
APTX-209ENST00000460940 EID2BQ96D98 161 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 SEC16BQ96JE7 1060 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 WDR92Q96MX6 357 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 LRRC1Q9BTT6 524 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 RIOK2Q9BVS4 552 aaKnown RBP11.02□□□□□ -0.65
APTX-209ENST00000460940 IRAK4Q9NWZ3 460 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 NOP53Q9NZM5 478 aaKnown RBP11.02□□□□□ -0.65
APTX-209ENST00000460940 PCYOX1Q9UHG3 505 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 DMGDHQ9UI17 866 aaKnown RBP11.02□□□□□ -0.65
APTX-209ENST00000460940 CD84Q9UIB8 345 aa11.02□□□□□ -0.65
APTX-209ENST00000460940 A6NHS1 94 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 GOLGA8CPA6NN73 597 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 TNFRSF10CO14798 259 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 AURKAO14965 403 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 FLRT2O43155 660 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 KRT14P02533 472 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 TPSB2P20231 275 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 LPOP22079 712 aaPredicted RBP11.01□□□□□ -0.65
APTX-209ENST00000460940 MAGEA6P43360 314 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 BASP1P80723 227 aaKnown RBP11.01□□□□□ -0.65
APTX-209ENST00000460940 CDK3Q00526 305 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 OLIG2Q13516 323 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 LAMB3Q13751 1172 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 SHBQ15464 509 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 TPSAB1Q15661 275 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 TPRG1LQ5T0D9 272 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 SLC30A9Q6PML9 568 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 PPP1R21Q6ZMI0 780 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 RFLNAQ6ZTI6 216 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 SYDE1Q6ZW31 735 aaPredicted RBP11.01□□□□□ -0.65
APTX-209ENST00000460940 PRUNE1Q86TP1 453 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 TAB3Q8N5C8 712 aaPredicted RBP11.01□□□□□ -0.65
APTX-209ENST00000460940 TRAM1L1Q8N609 369 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 EIF1ADQ8N9N8 165 aaKnown RBP11.01□□□□□ -0.65
APTX-209ENST00000460940 SPATA4Q8NEY3 305 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 STAMBPL1Q96FJ0 436 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 DNAJC28Q9NX36 388 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 DLL3Q9NYJ7 618 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 IL17CQ9P0M4 197 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 KLQ9UEF7 1012 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 NEU2Q9Y3R4 380 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 CABIN1Q9Y6J0 2220 aa11.01□□□□□ -0.65
APTX-209ENST00000460940 TP53BP1Q12888 1972 aaPredicted RBP11.01□□□□□ -0.65
APTX-209ENST00000460940 ADAMTS9Q9P2N4 1935 aa11□□□□□ -0.65
APTX-209ENST00000460940 STX7O15400 261 aaKnown RBP11□□□□□ -0.65
APTX-209ENST00000460940 CD59P13987 128 aa11□□□□□ -0.65
APTX-209ENST00000460940 BPIP17213 487 aa11□□□□□ -0.65
APTX-209ENST00000460940 SPAM1P38567 509 aa11□□□□□ -0.65
APTX-209ENST00000460940 GRK6P43250 576 aa11□□□□□ -0.65
APTX-209ENST00000460940 ROR2Q01974 943 aaKnown RBP11□□□□□ -0.65
APTX-209ENST00000460940 PPARDQ03181 441 aa11□□□□□ -0.65
APTX-209ENST00000460940 GPS1Q13098 491 aa11□□□□□ -0.65
APTX-209ENST00000460940 EIF2B5Q13144 721 aaKnown RBP11□□□□□ -0.65
APTX-209ENST00000460940 MSLNQ13421 630 aaPredicted RBP11□□□□□ -0.65
APTX-209ENST00000460940 KCTD16Q68DU8 428 aa11□□□□□ -0.65
APTX-209ENST00000460940 DBX2Q6ZNG2 339 aa11□□□□□ -0.65
APTX-209ENST00000460940 PELI3Q8N2H9 469 aa11□□□□□ -0.65
APTX-209ENST00000460940 DNAAF3Q8N9W5 541 aa11□□□□□ -0.65
APTX-209ENST00000460940 GPR26Q8NDV2 337 aa11□□□□□ -0.65
APTX-209ENST00000460940 OR56A4Q8NGH8 313 aa11□□□□□ -0.65
APTX-209ENST00000460940 SAP25Q8TEE9 199 aa11□□□□□ -0.65
APTX-209ENST00000460940 HIC2Q96JB3 615 aa11□□□□□ -0.65
APTX-209ENST00000460940 SPATA16Q9BXB7 569 aa11□□□□□ -0.65
APTX-209ENST00000460940 DDX47Q9H0S4 455 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms