RNA–Protein interactions for RNA: ENST00000458748.1

SCARNA2-201, small Cajal body-specific RNA 2, humanhuman

BASIC

Gene SCARNA2, Length 420 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA2-201ENST00000458748 GABREP78334 506 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 PDE1BQ01064 536 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 EIF3IQ13347 325 aaKnown RBP17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 CLPPQ16740 277 aaPredicted RBP17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 LRRC69Q6ZNQ3 347 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 ARHGEF18Q6ZSZ5 1173 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 NRROSQ86YC3 692 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 AVL9Q8NBF6 648 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 BLOC1S5Q8TDH9 187 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 GLYATL1Q969I3 302 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 WDR24Q96S15 920 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 FEZ2Q9UHY8 353 aaPredicted RBP17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 CNOT6Q9ULM6 557 aaKnown RBP17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 PACSIN2Q9UNF0 486 aaPredicted RBP17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 BAHCC1Q9P281 2608 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 CELSR3Q9NYQ7 3312 aa17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 FASNP49327 2511 aaKnown RBP17.36■□□□□ 0.37
SCARNA2-201ENST00000458748 ZFC3H1O60293 1989 aaKnown RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 C2orf81A6NN90 581 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 F5H423 210 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 DDX3YO15523 660 aaKnown RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 TLX3O43711 291 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 VEGFDO43915 354 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 NUAK1O60285 661 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 DNAJC6O75061 913 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 MPOP05164 745 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 BPIP17213 487 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 RBMS1P29558 406 aaKnown RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 MLLT3P42568 568 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 GPR3P46089 330 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 GTF2H3Q13889 308 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 P3H1Q32P28 736 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 CHST15Q7LFX5 561 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 C17orf82Q86X59 251 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 ARL14Q8N4G2 192 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 Q8N9G6 341 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 WDR36Q8NI36 951 aaKnown RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 BRSK1Q8TDC3 778 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 EID2BQ96D98 161 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 ATXN7L3BQ96GX2 97 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 TTC25Q96NG3 672 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 VPS35Q96QK1 796 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 FRMD8P1Q9BZ68 369 aaPredicted RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 ZCCHC2Q9C0B9 1178 aaKnown RBP17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 THSD1Q9NS62 852 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 RABGEF1Q9UJ41 708 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 PCDHGA8Q9Y5G5 932 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 SPO11Q9Y5K1 396 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 CAPN6Q9Y6Q1 641 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 RNF215Q9Y6U7 377 aa17.35■□□□□ 0.37
SCARNA2-201ENST00000458748 CCDC187A0A096LP49 1063 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 C5orf60A6NFR6 353 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 D6RAR5 112 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 LAMA5O15230 3695 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 GRID2O43424 1007 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 ECEL1O95672 775 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 VCLP18206 1134 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 ITPKBP27987 946 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 SPAM1P38567 509 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 CCL7P80098 99 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 ITGA9Q13797 1035 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 FAM182AQ5T1J6 154 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 AADACL2Q6P093 401 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 ZNF662Q6ZS27 426 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 SPRED1Q7Z699 444 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 LRRC8AQ8IWT6 810 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 GDAP1Q8TB36 358 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 PTCD2Q8WV60 388 aaKnown RBP17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 LIN37Q96GY3 246 aaPredicted RBP17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 HERPUD2Q9BSE4 406 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 FICDQ9BVA6 458 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 OR2AG1Q9H205 316 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 C10orf88Q9H8K7 445 aa17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 AKAP7Q9P0M2 348 aaPredicted RBP17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 OAS3Q9Y6K5 1087 aaKnown RBP17.34■□□□□ 0.37
SCARNA2-201ENST00000458748 UNC13CQ8NB66 2214 aa17.33■□□□□ 0.37
SCARNA2-201ENST00000458748 OR5K4A6NMS3 321 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 KMOO15229 486 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 STX7O15400 261 aaKnown RBP17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 PSMD3O43242 534 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 CRTAMO95727 393 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 PSMB4P28070 264 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 ABCG1P45844 678 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 INHBCP55103 352 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 KLF1Q13351 362 aaPredicted RBP17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 RPS6KA1Q15418 735 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 PARP6Q2NL67 630 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 MAP9Q49MG5 647 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 C3orf38Q5JPI3 329 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 LDLRAP1Q5SW96 308 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 ZNF438Q7Z4V0 828 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 CCDC110Q8TBZ0 833 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 TMEM159Q96B96 161 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 SH3KBP1Q96B97 665 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 BBC3Q96PG8 261 aaPredicted RBP17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 DPYSL5Q9BPU6 564 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 FAM118BQ9BPY3 351 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 BPIFA1Q9NP55 256 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 ATXN10Q9UBB4 475 aa17.33■□□□□ 0.36
SCARNA2-201ENST00000458748 SATB2Q9UPW6 733 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms