RNA–Protein interactions for RNA: ENST00000457368.2

NEDD1-204, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 3,162 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-204ENST00000457368 ELP6Q0PNE2 266 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 AUHQ13825 339 aaKnown RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 CNGA2Q16280 664 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 GOLGA7BQ2TAP0 167 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 ACCSLQ4AC99 568 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 SFRP5Q5T4F7 317 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 B3GNTL1Q67FW5 361 aaPredicted RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 RAP1GAP2Q684P5 730 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 RETSATQ6NUM9 610 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 PPP4R4Q6NUP7 873 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 FBXL22Q6P050 247 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 RPUSD3Q6P087 351 aaKnown RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 LETMD1Q6P1Q0 360 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 XKRXQ6PP77 449 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 UNC13DQ70J99 1090 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 BRAPQ7Z569 592 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 TAF8Q7Z7C8 310 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 TAC4Q86UU9 113 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 WFDC3Q8IUB2 231 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 PAF1Q8N7H5 531 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 FAM184AQ8NB25 1140 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 AVL9Q8NBF6 648 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 OR56A4Q8NGH8 313 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 THAP3Q8WTV1 239 aaPredicted RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 CASKIN2Q8WXE0 1202 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 NDRG1Q92597 394 aaKnown RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 TSACCQ96A04 125 aaPredicted RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 SLC2A13Q96QE2 648 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 SRPK1Q96SB4 655 aaKnown RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 SLX1AQ9BQ83 275 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 ENKD1Q9H0I2 346 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 TMEM8AQ9HCN3 771 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 FGF22Q9HCT0 170 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 AGPAT4Q9NRZ5 378 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 CISHQ9NSE2 258 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 RCOR3Q9P2K3 495 aaPredicted RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 HESX1Q9UBX0 185 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 XPO7Q9UIA9 1087 aaKnown RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 FBXO2Q9UK22 296 aaPredicted RBP2.11□□□□□ -2.07
NEDD1-204ENST00000457368 VPS28Q9UK41 221 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 B3GNT3Q9Y2A9 372 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 APCP25054 2843 aa2.11□□□□□ -2.07
NEDD1-204ENST00000457368 A6NCN8 305 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 LILRA5A6NI73 299 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 MASP2O00187 686 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PDXKO00764 312 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PCDH17O14917 1159 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 POLR1CO15160 346 aaPredicted RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PMM2O15305 246 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 SMAD6O43541 496 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ZNF500O60304 480 aaPredicted RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 RHOBTB3O94955 611 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 POP4O95707 220 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 TRUB2O95900 331 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 CD160O95971 181 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 IGHEP01854 428 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 TRIM49P0CI25 452 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 TRIM49CP0CI26 452 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 RPL10P27635 214 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PTPN4P29074 926 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ETFBP38117 255 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PIK3CAP42336 1068 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 NOP2P46087 812 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 CASP4P49662 377 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 CYP2J2P51589 502 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 GYS2P54840 703 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 YWHAEP62258 255 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 LONRF1Q17RB8 773 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PLEKHN1Q494U1 663 aaPredicted RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ZNF394Q53GI3 561 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 IZUMO3Q5VZ72 239 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ZNF324BQ6AW86 544 aaPredicted RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 SPOPLQ6IQ16 392 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 FOXR2Q6PJQ5 311 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 IGFL2Q6UWQ7 119 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ENPP7Q6UWV6 458 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 MED25Q71SY5 747 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 CXXC5Q7LFL8 322 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 KDELC2Q7Z4H8 507 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PRSS42Q7Z5A4 293 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 VPS36Q86VN1 386 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 KCNMB4Q86W47 210 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 NAGSQ8N159 534 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ATP11CQ8NB49 1132 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 CCDC150Q8NCX0 1101 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 RCBTB1Q8NDN9 531 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 CHDHQ8NE62 594 aaPredicted RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 OR10G6Q8NH81 332 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ABHD4Q8TB40 342 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 TAS1R2Q8TE23 839 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 KLHL6Q8WZ60 621 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 ARHGEF2Q92974 986 aaKnown RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 SH3KBP1Q96B97 665 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 C19orf60Q96EN9 201 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 PDXPQ96GD0 296 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 EAF1Q96JC9 268 aaPredicted RBP2.1□□□□□ -2.07
NEDD1-204ENST00000457368 COX4I2Q96KJ9 171 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 C1orf74Q96LT6 269 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 IP6K3Q96PC2 410 aa2.1□□□□□ -2.07
NEDD1-204ENST00000457368 FRMD8Q9BZ67 464 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms