RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 GABREP78334 506 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 MPP3Q13368 585 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 SPIDRQ14159 915 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 HLTFQ14527 1009 aaKnown RBP eCLIP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 RTP5Q14D33 572 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 PYCR3Q53H96 274 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 C3orf38Q5JPI3 329 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 SIRPB2Q5JXA9 342 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 ANKRD20A2Q5SQ80 823 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 ANKRD20A1Q5TYW2 823 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 ANKRD20A3Q5VUR7 823 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 FOXR1Q6PIV2 292 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 CHST15Q7LFX5 561 aaPredicted RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 GALNT13Q8IUC8 556 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 CDKL3Q8IVW4 592 aaPredicted RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 RAVER1Q8IY67 606 aaKnown RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 CYP4X1Q8N118 509 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 UBL4BQ8N7F7 174 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 BLOC1S5Q8TDH9 187 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 HNRNPLLQ8WVV9 542 aaKnown RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 PATE1Q8WXA2 126 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 SCARF2Q96GP6 870 aaPredicted RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 ATXN7L3BQ96GX2 97 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 GFM1Q96RP9 751 aaKnown RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 FERMT1Q9BQL6 677 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 GORASP1Q9BQQ3 440 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 FICDQ9BVA6 458 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 CDH19Q9H159 772 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 LRIT1Q9P2V4 623 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 DKK4Q9UBT3 224 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 TRHDEQ9UKU6 1024 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 GUCA1BQ9UMX6 200 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 EFR3BQ9Y2G0 817 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 ENTPD2Q9Y5L3 495 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 CAPN6Q9Y6Q1 641 aa9.38□□□□□ -0.91
CDC42EP3-203ENST00000453555 A0A1W2PQM1 296 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 RGSL1A5PLK6 1076 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 MIF4GDA9UHW6 222 aaKnown RBP9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 NTN3O00634 580 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 BUD23O43709 281 aaKnown RBP9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 DNAJC6O75061 913 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 TCEA3O75764 348 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 SLC25A14O95258 325 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 AGTP01019 485 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 GLB1P16278 677 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 PSMB4P28070 264 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 GEMP55040 296 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 BIRC2Q13490 618 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 OLIG2Q13516 323 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 SLC1A5Q15758 541 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 ZNF569Q5MCW4 686 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 CERCAMQ5T4B2 595 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 ITPRIPL1Q6GPH6 555 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 CCNJLQ8IV13 435 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 NAGSQ8N159 534 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 ARL14Q8N4G2 192 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 TRAM1L1Q8N609 369 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 OR6C4Q8NGE1 309 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 WDR48Q8TAF3 677 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 CCDC110Q8TBZ0 833 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 FSD1LQ9BXM9 530 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 OR2AG1Q9H205 316 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 GBA3Q9H227 469 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 LRRN3Q9H3W5 708 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 RAD18Q9NS91 495 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 VPS18Q9P253 973 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 ATXN10Q9UBB4 475 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 ATXN7L1Q9ULK2 861 aaPredicted RBP9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 SATB2Q9UPW6 733 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 KCNK6Q9Y257 313 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 DMXL2Q8TDJ6 3036 aa9.37□□□□□ -0.91
CDC42EP3-203ENST00000453555 A0A1W2PNU3 283 aaPredicted RBP9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 TCRBV7S2A1N4TA0A589 114 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 PMS2P1A4D2B8 440 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 GOLGA6L9A6NEM1 432 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 RHPN2P1A8MT19 583 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 GRID2O43424 1007 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 KRT86O43790 486 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 NUDT21O43809 227 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 SNX2O60749 519 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 MTX2O75431 263 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 ANXA9O76027 345 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 STK10O94804 968 aaKnown RBP9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 EML2O95834 649 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 ACP5P13686 325 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 ZNF8P17098 575 aaPredicted RBP9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 HLA-DPA1P20036 260 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 ALDH4A1P30038 563 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 ACTN2P35609 894 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 PDX1P52945 283 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 OR1D5P58170 312 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 DCDC1P59894 354 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 PRPSAP1Q14558 356 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 PTPRCAPQ14761 206 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 PLA2G4EQ3MJ16 856 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 AMZ1Q400G9 498 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 GLT6D1Q7Z4J2 308 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 SPRED1Q7Z699 444 aa9.36□□□□□ -0.91
CDC42EP3-203ENST00000453555 B3GNT8Q7Z7M8 397 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms