RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 ADAMTSL2Q86TH1 951 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 OR7A2PQ8NGA2 310 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 NARFLQ9H6Q4 476 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 PLAC1Q9HBJ0 212 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 SYTL2Q9HCH5 934 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 OAZ3Q9UMX2 235 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 PRORSD1PA6NEY8 169 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZBBXA8MT70 800 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 PDZK1P1A8MUH7 402 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 MEN1O00255 615 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 SPNP16150 400 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 ZNF157P51786 506 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 INTS6LQ5JSJ4 861 aaKnown RBP13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 GLRA4Q5JXX5 417 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 DHFR2Q86XF0 187 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 OR6F1Q8NGZ6 308 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 LPIN3Q9BQK8 851 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 ACE2Q9BYF1 805 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 PLSCR3Q9NRY6 295 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 RNF19AQ9NV58 838 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 TOR4AQ9NXH8 423 aa13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 PAQR5Q9NXK6 330 aaPredicted RBP13.4□□□□□ -0.26
SYNGAP1-204ENST00000449372 C12orf71A8MTZ7 269 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM25AB3EWG3 89 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM25CB3EWG5 89 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 FAM25GB3EWG6 89 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 UPK1BO75841 260 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SRP72O76094 671 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 FCGR1AP12314 374 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SULT1E1P49888 294 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 ACOT1Q86TX2 421 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 ISL2Q96A47 359 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 UNC93B1Q9H1C4 597 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 ADNPQ9H2P0 1102 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLA2Q9H6Q3 261 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 UBQLN1Q9UMX0 589 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 ACOT9Q9Y305 439 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 EI24O14681 340 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SEC24AO95486 1093 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 GSTM1P09488 218 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 CCDC159P0C7I6 412 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 NUDT1P36639 197 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 MAP3K7CLP57077 242 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 BNIP2Q12982 314 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 PPP1R3AQ16821 1122 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 CYBRD1Q53TN4 286 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 VPS37AQ8NEZ2 397 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SOCS4Q8WXH5 440 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 TTC9Q92623 222 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 TSPAN17Q96FV3 270 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC25A23Q9BV35 468 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 ING2Q9H160 280 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SMPD3Q9NY59 655 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 BAG5Q9UL15 447 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 EEF2KO00418 725 aaKnown RBP13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 CYP2B6P20813 491 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 PNPLA4P41247 253 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 GRIA1P42261 906 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SLC9A3P48764 834 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 GBE1Q04446 702 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 SQLEQ14534 574 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 PSMD5Q16401 504 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 C7orf31Q8N865 590 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 NAT16Q8N8M0 369 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 LEMD2Q8NC56 503 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 PIK3R3Q92569 461 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 VPS39Q96JC1 886 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 GINS2Q9Y248 185 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 IPPQ9Y573 584 aa13.39□□□□□ -0.27
SYNGAP1-204ENST00000449372 E2F8A0AVK6 867 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 C17orf102A2RUQ5 167 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 KCNU1A8MYU2 1149 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 NPHS1O60500 1241 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PIGNO95427 931 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 CD4P01730 458 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 POU6F2P78424 691 aaPredicted RBP13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 CTF1Q16619 201 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 FSCN1Q16658 493 aaKnown RBP13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 AGAP6Q5VW22 663 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 KCNMB4Q86W47 210 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 TNS4Q8IZW8 715 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PIK3C3Q8NEB9 887 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 AGAP4Q96P64 663 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 EPS8L2Q9H6S3 715 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 OXSMQ9NWU1 459 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 IL37Q9NZH6 218 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 GTF2IRD1Q9UHL9 959 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 CEP350Q5VT06 3117 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 H3BUI4 141 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 PTGESO14684 152 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 TBX1O43435 398 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 LMO2P25791 158 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 GSTM2P28161 218 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 HTR2BP41595 481 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 CATSPEREQ5SY80 951 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 TMEM236Q5W0B7 351 aa13.38□□□□□ -0.27
SYNGAP1-204ENST00000449372 KIAA1841Q6NSI8 718 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms