RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 CHRM3P20309 590 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 MAGP20916 626 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 HPCAL1P37235 193 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PTPN9P43378 593 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TNK2Q07912 1038 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CAMK1Q14012 370 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 LRP8Q14114 963 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 HERC3Q15034 1050 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 POLD3Q15054 466 aaPredicted RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SPANXN3Q5MJ09 141 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 RTP2Q5QGT7 225 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TPGS2Q68CL5 300 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 CLEC6AQ6EIG7 209 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 DCP1BQ8IZD4 617 aaKnown RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TERB1Q8NA31 727 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 ABHD11Q8NFV4 315 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 HASPINQ8TF76 798 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SGCDQ92629 289 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 HTRA1Q92743 480 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 EXT2Q93063 718 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 TNIP3Q96KP6 325 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 PRDM12Q9H4Q4 367 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 EPS8L2Q9H6S3 715 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SMPD3Q9NY59 655 aaPredicted RBP8.09□□□□□ -1.11
LINC00954-202ENST00000449086 KIAA1257Q9ULG3 409 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 SSUH2Q9Y2M2 353 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 ACOT9Q9Y305 439 aa8.09□□□□□ -1.11
LINC00954-202ENST00000449086 VWA8A3KMH1 1905 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 EPOPA6NHQ4 379 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CILPO75339 1184 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 GABBR2O75899 941 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 RSL1D1O76021 490 aaKnown RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 KRT75O95678 551 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CAPNS1P04632 268 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ADH1AP07327 375 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 BMP2P12643 396 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 MLNP12872 115 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 DNAJB1P25685 340 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ADSLP30566 484 aaPredicted RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 RAB33AQ14088 237 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 FAM83EQ2M2I3 478 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 SLC36A3Q495N2 470 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 VPS26BQ4G0F5 336 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 WSCD1Q658N2 575 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NCBP2-AS2Q69YL0 99 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CNSTQ6PJW8 725 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CRTC3Q6UUV7 619 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CYS1Q717R9 158 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 TAS1R1Q7RTX1 841 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 KDELC2Q7Z4H8 507 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ACOT1Q86TX2 421 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ZNF567Q8N184 647 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CRYBG2Q8N1P7 616 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ANKFN1Q8N957 763 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 KDM1BQ8NB78 822 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 SNX19Q92543 992 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 SLC45A3Q96JT2 553 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CEP295NLQ96MC4 621 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 MUS81Q96NY9 551 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ALPK1Q96QP1 1244 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 KCTD15Q96SI1 283 aaPredicted RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 GAS2L1Q99501 681 aaPredicted RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 SLC25A23Q9BV35 468 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 LHPPQ9H008 270 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NACA2Q9H009 215 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 GBA3Q9H227 469 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NSUN3Q9H649 340 aaKnown RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 HMG20AQ9NP66 347 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 UTP6Q9NYH9 597 aaKnown RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 KIAA1522Q9P206 1035 aaPredicted RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 GIMAP2Q9UG22 337 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 PSME2Q9UL46 239 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NOX1Q9Y5S8 564 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 AP3B1O00203 1094 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 TRIM24O15164 1050 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 SLC22A2O15244 555 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CXCL14O95715 111 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 APOA4P06727 396 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 POU2F2P09086 479 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CAPGP40121 348 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 RPS9P46781 194 aaKnown RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 PRKAA2P54646 552 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 SLC12A2P55011 1212 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ERVFC1P60507 584 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CLCQ05315 142 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NSUN2Q08J23 767 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NAB1Q13506 487 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CSHL1Q14406 222 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 RPS6KA2Q15349 733 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 NFE2Q16621 373 aaPredicted RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 PHKG1Q16816 387 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CTXN3Q4LDR2 81 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 TIGD2Q4W5G0 525 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 PAGE2BQ5JRK9 111 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 FRA10AC1Q70Z53 315 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CLEC4FQ8N1N0 589 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 CLIP4Q8N3C7 705 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ZCCHC7Q8N3Z6 543 aaKnown RBP8.08□□□□□ -1.12
LINC00954-202ENST00000449086 ANKRD52Q8NB46 1076 aa8.08□□□□□ -1.12
LINC00954-202ENST00000449086 DNAJB14Q8TBM8 379 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms