RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 TANKQ92844 425 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 MED30Q96HR3 178 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 RSRC1Q96IZ7 334 aaKnown RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 CMKLR1Q99788 373 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 NCAPGQ9BPX3 1015 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 PIGMQ9H3S5 423 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 MAGIXQ9H6Y5 334 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 SMARCAL1Q9NZC9 954 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ADD3Q9UEY8 706 aaKnown RBP4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 NENFQ9UMX5 172 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 TONSLQ96HA7 1378 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 ITSN2Q9NZM3 1697 aa4.48□□□□□ -1.69
HMGB3P6-201ENST00000444896 PDS5AQ29RF7 1337 aaKnown RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CDK13Q14004 1512 aaKnown RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 MAGI3Q5TCQ9 1506 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 GOLGA6L9A6NEM1 432 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CDRT15L2A8MXV6 281 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF587BE7ETH6 402 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 HS6ST1O60243 411 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 KCNK5O95279 499 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 PAPSS2O95340 614 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 RB1P06400 928 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 PORP16435 677 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 TMEM11P17152 192 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 ANXA7P20073 488 aaKnown RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 BDNFP23560 247 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 RRM1P23921 792 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 HOXA13P31271 388 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 ACSL1P33121 698 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 FASLGP48023 281 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CAMPP49913 170 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CLCNKAP51800 687 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CDC16Q13042 620 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 IKQ13123 557 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 AIMP2Q13155 320 aaKnown RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 PRKG2Q13237 762 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 ACVR2BQ13705 512 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 SF3B4Q15427 424 aaKnown RBP eCLIP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CALCRLQ16602 461 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 PNLIPRP3Q17RR3 467 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 ZNF805Q5CZA5 627 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 DCST1Q5T197 706 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 BRAT1Q6PJG6 821 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 MEPCEQ7L2J0 689 aaKnown RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 C16orf82Q7Z2V1 217 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 ATG9AQ7Z3C6 839 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 RPAP2Q8IXW5 612 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 LILRB1Q8NHL6 650 aaPredicted RBP4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 MAGEC3Q8TD91 643 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 TRPC4APQ8TEL6 797 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 DUSP19Q8WTR2 217 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 TAAR8Q969N4 342 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 GAD1Q99259 594 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 TM6SF1Q9BZW5 370 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 PLK3Q9H4B4 646 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 SMARCAD1Q9H4L7 1026 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 CD93Q9NPY3 652 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 PAG1Q9NWQ8 432 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 MCM9Q9NXL9 1143 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 WWOXQ9NZC7 414 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 FBXW11Q9UKB1 542 aa4.47□□□□□ -1.69
HMGB3P6-201ENST00000444896 NAIPQ13075 1403 aa4.46□□□□□ -1.69
HMGB3P6-201ENST00000444896 DISP1Q96F81 1524 aa4.46□□□□□ -1.69
HMGB3P6-201ENST00000444896 A0A1W2PR77 199 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 hCG_1807616A0A1W2PRN6 198 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 H3BQ06 376 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 SPINT2O43291 252 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 TPPPO94811 219 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 TUBBP07437 444 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 S1PR1P21453 382 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 PON1P27169 355 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 PEX5P50542 639 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 TAS2R38P59533 333 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 TFAP4Q01664 338 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 FOXM1Q08050 763 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 SPOCK1Q08629 439 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 ACSM2AQ08AH3 577 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 SREBF2Q12772 1141 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 CUL4AQ13619 759 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 KEAP1Q14145 624 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 ZNF585BQ52M93 769 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 KCNT1Q5JUK3 1230 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 PLEKHS1Q5SXH7 462 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 ACSM2BQ68CK6 577 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 C18orf63Q68DL7 685 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 ZNF324BQ6AW86 544 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 RGMBQ6NW40 437 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 PRSS57Q6UWY2 283 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 CREB3L2Q70SY1 520 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 BRINP3Q76B58 766 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 HACE1Q8IYU2 909 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 RBMXL3Q8N7X1 1067 aaKnown RBP4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 ACVR1CQ8NER5 493 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 OR5R1Q8NH85 324 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 LMO3Q8TAP4 145 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 HM13Q8TCT9 377 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 RTP4Q96DX8 246 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 MTBPQ96DY7 904 aa4.46□□□□□ -1.7
HMGB3P6-201ENST00000444896 OR1F2PQ96R84 312 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms