RNA–Protein interactions for RNA: ENST00000444237.2

SCN11A-202, Transcript of sodium voltage-gated channel alpha subunit 11, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SCN11A, Length 5,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11A-202ENST00000444237 VRTNQ9H8Y1 702 aa5.13□□□□□ -1.59
SCN11A-202ENST00000444237 ATP13A2Q9NQ11 1180 aa5.13□□□□□ -1.59
SCN11A-202ENST00000444237 UFSP2Q9NUQ7 469 aa5.13□□□□□ -1.59
SCN11A-202ENST00000444237 RIMKLBQ9ULI2 386 aa5.13□□□□□ -1.59
SCN11A-202ENST00000444237 MON2Q7Z3U7 1717 aa5.13□□□□□ -1.59
SCN11A-202ENST00000444237 RAB19A4D1S5 217 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 NT5C1B-RDH14C9J2C7 533 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 INMT-MINDY4F8WBC2 141 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 AP3D1O14617 1153 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SNX4O95219 450 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 GNAO1P09471 354 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 RPS5P46782 204 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 NDST1P52848 882 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CDH4P55283 916 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 GPX6P59796 221 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 C1QTNF8P60827 252 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 KCNA10Q16322 511 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ZBTB33Q86T24 672 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 LHFPL3Q86UP9 236 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 FAM71AQ8IYT1 594 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 VWA5B2Q8N398 1253 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 COLGALT1Q8NBJ5 622 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 DCAKDQ8WVC6 231 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CELF1Q92879 486 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 FAM84AQ96KN4 292 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ZNF597Q96LX8 424 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 DPAGT1Q9H3H5 408 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ERVMER34-1Q9H9K5 563 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 IFT46Q9NQC8 304 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 KLHL1Q9NR64 748 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ENPP5Q9UJA9 477 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 MAFFQ9ULX9 164 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SAMD4AQ9UPU9 718 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 AAR2Q9Y312 384 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SNCAIPQ9Y6H5 919 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 C1orf196B1AJZ1 125 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SLC30A4O14863 429 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 MID1O15344 667 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 INPPL1O15357 1258 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 NDST3O95803 873 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SMIM18P0DKX4 95 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ZNF14P17017 642 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 TFEBP19484 476 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 JAM2P57087 298 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 DBPQ10586 325 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 BTN1A1Q13410 526 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 APOFQ13790 326 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CREB3L2Q70SY1 520 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 LACC1Q8IV20 430 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 UBE2J2Q8N2K1 259 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CPSF7Q8N684 471 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 GDPD1Q8N9F7 314 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 WDSUB1Q8N9V3 476 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 OR2T12Q8NG77 320 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ZNF671Q8TAW3 534 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 FANK1Q8TC84 345 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 PHF10Q8WUB8 498 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 PHF21BQ96EK2 531 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 BBS4Q96RK4 519 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CNPPD1Q9BV87 410 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 DPCDQ9BVM2 203 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 RAVER2Q9HCJ3 691 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 PTTG3PQ9NZH4 202 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 COG5Q9UP83 839 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CMAHPQ9Y471 501 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 MAU2Q9Y6X3 613 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 AHDC1Q5TGY3 1603 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 EEF2KO00418 725 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 IFRD1O00458 451 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 KPNA5O15131 536 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SGTAO43765 313 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CDC40O60508 579 aaKnown RBP eCLIP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 BCAS1O75363 584 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 PIAS1O75925 651 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 HPRP00739 348 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 TRAPPC2P0DI81 140 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 TRAPPC2BP0DI82 140 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CLUP10909 449 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CES1P23141 567 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 KDELR1P24390 212 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 PCSK6P29122 969 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 EVI2BP34910 448 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 MAP2K3P46734 347 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 PTPN5P54829 565 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 ALDH6A1Q02252 535 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SNTA1Q13424 505 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 HIST2H2ACQ16777 129 aaPredicted RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 GPAT3Q53EU6 434 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 IGSF11Q5DX21 431 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 DCAF15Q66K64 600 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CGB2Q6NT52 195 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 IZUMO1Q8IYV9 350 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 LRRC71Q8N4P6 559 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CPT1BQ92523 772 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 LGALS12Q96DT0 336 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 CDCA5Q96FF9 252 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 VAT1Q99536 393 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 NEURL2Q9BR09 285 aa5.12□□□□□ -1.59
SCN11A-202ENST00000444237 SARS2Q9NP81 518 aaKnown RBP5.12□□□□□ -1.59
SCN11A-202ENST00000444237 RASSF1Q9NS23 344 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms