RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 LPAL2Q16609 132 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 MAP9Q49MG5 647 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 HSP90AA5PQ58FG0 334 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 LDLRAP1Q5SW96 308 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 PSAPL1Q6NUJ1 521 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 ZNF449Q6P9G9 518 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 PHYKPLQ8IUZ5 450 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 UNC5BQ8IZJ1 945 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 NXPE1Q8N323 547 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 OTUD6BQ8N6M0 293 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 OR13H1Q8NG92 308 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 AENQ8WTP8 325 aaKnown RBP15.65■□□□□ 0.1
USP40-206ENST00000443711 FUBP1Q96AE4 644 aaKnown RBP15.65■□□□□ 0.1
USP40-206ENST00000443711 TCF12Q99081 682 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 TXLNGYQ9BZA5 131 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 PPANQ9NQ55 473 aaKnown RBP15.65■□□□□ 0.1
USP40-206ENST00000443711 MOCS1Q9NZB8 636 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 TMPRSS11EQ9UL52 423 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 OR1A2Q9Y585 309 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 SLCO1B1Q9Y6L6 691 aa15.65■□□□□ 0.1
USP40-206ENST00000443711 GOLGA8KD6RF30 607 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 GOLGA8TH3BQL2 631 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 VILLO15195 856 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 PFDN6O15212 129 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 GPR39O43194 453 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 EPN2O95208 641 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 PRSS56P0CW18 603 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 THEGLP0DJG4 465 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 ERVK-10P10266 1014 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 MYCLP1P12525 358 aaPredicted RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 OGNP20774 298 aaKnown RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 HTR1BP28222 390 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 PMLP29590 882 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 STX2P32856 288 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 TTPAP49638 278 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 CDKN1CP49918 316 aaPredicted RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 PTK2BQ14289 1009 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 NFATC4Q14934 902 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 BRD3Q15059 726 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 GPRC6AQ5T6X5 926 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 PEAR1Q5VY43 1037 aaPredicted RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 LAIR1Q6GTX8 287 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 TRMT10BQ6PF06 316 aaKnown RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 KDM7AQ6ZMT4 941 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 MICALCLQ6ZW33 695 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 SERPINA9Q86WD7 417 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 PIANPQ8IYJ0 282 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 DDHD1Q8NEL9 900 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 CEP76Q8TAP6 659 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 HEXDCQ8WVB3 486 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 SCG3Q8WXD2 468 aaKnown RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 COX14Q96I36 57 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 COPS8Q99627 209 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 LGR4Q9BXB1 951 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 TRIM39Q9HCM9 518 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 IARS2Q9NSE4 1012 aaKnown RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 TMEM74BQ9NUR3 256 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 ZDHHC3Q9NYG2 299 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 IL1RAPL1Q9NZN1 696 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 MARCH4Q9P2E8 410 aaPredicted RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 SMG5Q9UPR3 1016 aaKnown RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 PCDHGA5Q9Y5G8 931 aa15.64■□□□□ 0.09
USP40-206ENST00000443711 ATXN2Q99700 1313 aaKnown RBP15.64■□□□□ 0.09
USP40-206ENST00000443711 TCRBV9S1A1TA0A576 114 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 TLR4O00206 839 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 VEGFDO43915 354 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ERLIN1O75477 346 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ACSL3O95573 720 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ASMTLO95671 621 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 WNT1P04628 370 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 RALBP11234 206 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ACRV1P26436 265 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 AKT1P31749 480 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 CA5AP35218 305 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 CSNK1EP49674 416 aaKnown RBP15.63■□□□□ 0.09
USP40-206ENST00000443711 C21orf59P57076 290 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 PDE1CQ14123 709 aaPredicted RBP15.63■□□□□ 0.09
USP40-206ENST00000443711 SEMA3AQ14563 771 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ITIH4Q14624 930 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 SMAD1Q15797 465 aaKnown RBP15.63■□□□□ 0.09
USP40-206ENST00000443711 DBN1Q16643 649 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 DUOXA1Q1HG43 343 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ZNF470Q6ECI4 717 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 FBF1Q8TES7 1133 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 CDKL2Q92772 493 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 CAVIN3Q969G5 261 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 DCUN1D1Q96GG9 259 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 WDR92Q96MX6 357 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 ZCCHC2Q9C0B9 1178 aaKnown RBP15.63■□□□□ 0.09
USP40-206ENST00000443711 ZFATQ9P243 1243 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 HCN4Q9Y3Q4 1203 aa15.63■□□□□ 0.09
USP40-206ENST00000443711 RALGAPA1Q6GYQ0 2036 aa15.62■□□□□ 0.09
USP40-206ENST00000443711 A0A087WUV0 522 aaPredicted RBP15.62■□□□□ 0.09
USP40-206ENST00000443711 CFAP99D6REC4 459 aa15.62■□□□□ 0.09
USP40-206ENST00000443711 NDUFS3O75489 264 aa15.62■□□□□ 0.09
USP40-206ENST00000443711 MSH3P20585 1137 aa15.62■□□□□ 0.09
USP40-206ENST00000443711 TYSND1Q2T9J0 566 aa15.62■□□□□ 0.09
USP40-206ENST00000443711 TEDDM1Q5T9Z0 273 aa15.62■□□□□ 0.09
USP40-206ENST00000443711 RNF187Q5TA31 235 aaPredicted RBP15.62■□□□□ 0.09
USP40-206ENST00000443711 MACC1Q6ZN28 852 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms