RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 USP41Q3LFD5 358 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 PPP1R21Q6ZMI0 780 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 GBP6Q6ZN66 633 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 INTS8Q75QN2 995 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 LPCAT2Q7L5N7 544 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 UEVLDQ8IX04 471 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZBTB2Q8N680 514 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 IQUBQ8NA54 791 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 FAM47BQ8NA70 645 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CMASQ8NFW8 434 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 OR52K2Q8NGK3 314 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 OR8K5Q8NH50 307 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 EXTL1Q92935 676 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 AK8Q96MA6 479 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC43Q96MW1 224 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 INTS14Q96SY0 518 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 ZPBPQ9BS86 351 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 UTP14AQ9BVJ6 771 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 CWC15Q9P013 229 aaKnown RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 AKAP7Q9P0M2 348 aaPredicted RBP4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 KCNK7Q9Y2U2 307 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 JRKLQ9Y4A0 524 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 MAST3O60307 1309 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 IGSF1Q8N6C5 1336 aa4.11□□□□□ -1.75
CDC42BPA-207ENST00000441725 MAGEB17A8MXT2 336 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 RIPK2O43353 540 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 KERAO60938 352 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 GPC4O75487 556 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 NEURL1O76050 574 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TMCC1O94876 653 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CELF2O95319 508 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 BMP7P18075 431 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CYP11B2P19099 503 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 HOXA7P31268 230 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ASMTP46597 345 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 BMXP51813 675 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CAPZA1P52907 286 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CDH13P55290 713 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TUBB4BP68371 445 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCNA1P78396 465 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TRAF1Q13077 416 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 NEDD9Q14511 834 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 LASP1Q14847 261 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 PGM5Q15124 567 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 PRAMEF19Q5SWL8 479 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TMEM211Q6ICI0 200 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TRIM72Q6ZMU5 477 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 RHOUQ7L0Q8 258 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ADCK2Q7Z695 626 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ADIPOR2Q86V24 386 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 KRT222Q8N1A0 295 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 AADATQ8N5Z0 425 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CORO2AQ92828 525 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 KAT2BQ92831 832 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 RRNAD1Q96FB5 475 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 C8orf76Q96K31 380 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 DACH2Q96NX9 599 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TNMDQ9H2S6 317 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CNOT10Q9H9A5 744 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ACTR5Q9H9F9 607 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 MTMR10Q9NXD2 777 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ST6GALNAC2Q9UJ37 374 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TRAF3IP3Q9Y228 551 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TCAF1Q9Y4C2 921 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 SLC22A23A1A5C7 686 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CGB1A6NKQ9 187 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ENO4A6NNW6 628 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 BTBD19C9JJ37 291 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 K7EPI3 171 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 NDC80O14777 642 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 SMPD2O60906 423 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 JRKO75564 520 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 RSL1D1O76021 490 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TRUB2O95900 331 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ACHEP22303 614 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 PEX5P50542 639 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 GPR143P51810 404 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TKTL1P51854 596 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ADORA2A-AS1P86434 159 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 HOXA4Q00056 320 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 RELQ04864 619 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 NAE1Q13564 534 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 C2orf68Q2NKX9 166 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 SMU1Q2TAY7 513 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC152Q4G0S7 254 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ESCO2Q56NI9 601 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CCDC183Q5T5S1 534 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 MEX3CQ5U5Q3 659 aaKnown RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ARHGAP11AQ6P4F7 1023 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 TEX38Q6PEX7 206 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 CYB5R4Q7L1T6 521 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 RASAL3Q86YV0 1011 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ARID3BQ8IVW6 561 aaPredicted RBP4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 C10orf53Q8N6V4 93 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 OR6C4Q8NGE1 309 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 ACTRT2Q8TDY3 377 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 SNAPC3Q92966 411 aa4.1□□□□□ -1.75
CDC42BPA-207ENST00000441725 FBXL8Q96CD0 374 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms