RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 WNT3AP56704 352 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 COPS2P61201 443 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 B4GALNT1Q00973 533 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 ADCY2Q08462 1091 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 WASHC5Q12768 1159 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 CRTC3Q6UUV7 619 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 BBS12Q6ZW61 710 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 ZNF438Q7Z4V0 828 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 C17orf82Q86X59 251 aaPredicted RBP19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 ZNF567Q8N184 647 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 SLC25A41Q8N5S1 370 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 GPR26Q8NDV2 337 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 GDAP1Q8TB36 358 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 PRR11Q96HE9 360 aaPredicted RBP19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 WDR24Q96S15 920 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 UBL7Q96S82 380 aaPredicted RBP19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 CARD9Q9H257 536 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 PRORYQ9H606 182 aa19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 CNOT6Q9ULM6 557 aaKnown RBP19.66■□□□□ 0.74
SHROOM1-204ENST00000440118 CCDC66A2RUB6 948 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 CDRT15L2A8MXV6 281 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 GOLGA6L6A8MZA4 724 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 GRID2O43424 1007 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 DNAJC6O75061 913 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 MAPK10P53779 464 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 CLPPQ16740 277 aaPredicted RBP19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 PLA2G4EQ3MJ16 856 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 PDPK2PQ6A1A2 396 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 ITPRIPL1Q6GPH6 555 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 TMC3Q7Z5M5 1100 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 CLEC14AQ86T13 490 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 CDKL3Q8IVW4 592 aaPredicted RBP19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 ACRBPQ8NEB7 543 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 SLC37A2Q8TED4 501 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 TADA1Q96BN2 335 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 BAG1Q99933 345 aaPredicted RBP19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 NUDT22Q9BRQ3 303 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 HERPUD2Q9BSE4 406 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 SEMA6CQ9H3T2 930 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 BPIFA1Q9NP55 256 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 ATXN10Q9UBB4 475 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 TRHDEQ9UKU6 1024 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 SPO11Q9Y5K1 396 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 LOC400499M0QZD8 3231 aa19.65■□□□□ 0.74
SHROOM1-204ENST00000440118 BPTFQ12830 3046 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 B4GAT1O43505 415 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 NUAK1O60285 661 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 HOXB3P14651 431 aaPredicted RBP19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 SLC5A2P31639 672 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 CD68P34810 354 aaPredicted RBP19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 VAV2P52735 878 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 RWDD2BP57060 319 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 HHEXQ03014 270 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 ZFP36L1Q07352 338 aaKnown RBP19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 MPP3Q13368 585 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 XRCC4Q13426 336 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 GTF2H3Q13889 308 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 NR1D2Q14995 579 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 INSCQ1MX18 579 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 SIRPB2Q5JXA9 342 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 ZNF648Q5T619 568 aaPredicted RBP19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 NKAIN2Q5VXU1 208 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 RAD9BQ6WBX8 426 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 GLT6D1Q7Z4J2 308 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 ZNF761Q86XN6 746 aaPredicted RBP19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 SLITRK4Q8IW52 837 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 OR10G6Q8NH81 332 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 BLOC1S5Q8TDH9 187 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 GLYATL1Q969I3 302 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 EID2BQ96D98 161 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 FCRL5Q96RD9 977 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 OSBPL8Q9BZF1 889 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 TRABDQ9H4I3 376 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 CPNE5Q9HCH3 593 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 HACD3Q9P035 362 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 NFKBIL1Q9UBC1 381 aaPredicted RBP19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 PCDHA3Q9Y5H8 950 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 AHCTF1Q8WYP5 2266 aa19.64■□□□□ 0.73
SHROOM1-204ENST00000440118 RCCD1A6NED2 376 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 GPR89AB7ZAQ6 455 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 PPM1DO15297 605 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 DUX1O43812 170 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 GPR89BP0CG08 455 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 ZNF8P17098 575 aaPredicted RBP19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 BPIP17213 487 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 ITIH1P19827 911 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 HLA-DPA1P20036 260 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 FECHP22830 423 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 MAPK9P45984 424 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 GPLD1P80108 840 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 OTUD4Q01804 1114 aaKnown RBP19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 NFATC2Q13469 925 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 NOMO1Q15155 1222 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 ARHGAP40Q5TG30 622 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 TMEM164Q5U3C3 297 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 KDELC1Q6UW63 502 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 SLC9B2Q86UD5 537 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 SFRP1Q8N474 314 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 ACTL9Q8TC94 416 aa19.63■□□□□ 0.73
SHROOM1-204ENST00000440118 CCDC74BQ96LY2 380 aa19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms