RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 MIPEPQ99797 713 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FEM1AQ9BSK4 669 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 FAM167BQ9BTA0 163 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 VCXQ9H320 206 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RHOJQ9H4E5 214 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 C6orf106Q9H6K1 298 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ARNT2Q9HBZ2 717 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TRPV5Q9NQA5 729 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RIMKLBQ9ULI2 386 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ITM2BQ9Y287 266 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MAD1L1Q9Y6D9 718 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 A0A1B0GVM2 712 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TCAF2A6NFQ2 919 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 A6NHS1 94 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 NVLO15381 856 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 NPHS1O60500 1241 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 DIAPH2O60879 1101 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SDC3O75056 442 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CBX6O95503 412 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 DNTTP04053 509 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CRABP2P29373 138 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PGM1P36871 562 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MPLP40238 635 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CLNS1AP54105 237 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MLLT6P55198 1093 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 HNRNPDQ14103 355 aaKnown RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PDE1CQ14123 709 aaPredicted RBP4.75□□□□□ -1.65
EDEM3-203ENST00000439962 E2F5Q15329 346 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TAF11Q15544 211 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SPATS1Q496A3 300 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PLK5Q496M5 336 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PCID2Q5JVF3 399 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SYCP2LQ5T4T6 812 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MANEALQ5VSG8 457 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MSANTD2Q6P1R3 559 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CDHR3Q6ZTQ4 885 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 AHI1Q8N157 1196 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PHTF2Q8N3S3 785 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 HDDC3Q8N4P3 179 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PPP1R14CQ8TAE6 165 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 CALML6Q8TD86 181 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ACTRT2Q8TDY3 377 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 DNAJC9Q8WXX5 260 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 MIEF2Q96C03 454 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 TBC1D31Q96DN5 1066 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SPACA7Q96KW9 195 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 IL12RB2Q99665 862 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 RTKNQ9BST9 563 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 C10orf88Q9H8K7 445 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PRSS16Q9NQE7 514 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 AASDHPPTQ9NRN7 309 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SEMA4GQ9NTN9 838 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 PCMTD2Q9NV79 361 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 SEPT10Q9P0V9 454 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 VPS51Q9UID3 782 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 EMCNQ9ULC0 261 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ZNF510Q9Y2H8 683 aa4.75□□□□□ -1.65
EDEM3-203ENST00000439962 ANKRD36A6QL64 1941 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ADAMTS9Q9P2N4 1935 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 NUP210Q8TEM1 1887 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TRPM6Q9BX84 2022 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ZCWPW2A0A1B0GU75 182 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 C4orf47A7E2U8 309 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 H0Y8X5 98 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 GOLGA8RI6L899 631 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 J3KR12 359 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TPP1O14773 563 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 GIPC1O14908 333 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TRIM13O60858 407 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 AVILO75366 819 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 UGT2B4P06133 528 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 RALBP11234 206 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CPA3P15088 417 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ERCC2P18074 760 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MGAT1P26572 445 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TYK2P29597 1187 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 HOXD11P31277 338 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PTDSS1P48651 473 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 NRLP54845 237 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 AQP5P55064 265 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PDE1BQ01064 536 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PRKAA1Q13131 559 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MPP3Q13368 585 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 COL9A2Q14055 689 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 POLD3Q15054 466 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ANKRD20A4Q4UJ75 823 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ARSIQ5FYB1 569 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 N4BP2L1Q5TBK1 243 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 KIAA0930Q6ICG6 404 aaPredicted RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CXorf57Q6NSI4 855 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PGM2L1Q6PCE3 622 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 TRMT10BQ6PF06 316 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 NCEH1Q6PIU2 408 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 EPGNQ6UW88 154 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 ZYG11AQ6WRX3 759 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 CYP2U1Q7Z449 544 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 MARCH9Q86YJ5 346 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 AFAP1L2Q8N4X5 818 aa4.74□□□□□ -1.65
EDEM3-203ENST00000439962 PDCD7Q8N8D1 485 aaKnown RBP4.74□□□□□ -1.65
EDEM3-203ENST00000439962 SUMF1Q8NBK3 374 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms