RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 UFM1P61960 85 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 PRKCZQ05513 592 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 BNIP2Q12982 314 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 PTPRCAPQ14761 206 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 CTU2Q2VPK5 515 aaKnown RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 TERB1Q8NA31 727 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 APPL2Q8NEU8 664 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 FSD1LQ9BXM9 530 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 CCDC90BQ9GZT6 254 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 FAM49AQ9H0Q0 323 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ATAD3AQ9NVI7 634 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 INTS10Q9NVR2 710 aaKnown RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ERAP1Q9NZ08 941 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 MARCH4Q9P2E8 410 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 KCTD3Q9Y597 815 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 TIMM13Q9Y5L4 95 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 CLDN25C9JDP6 229 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 KPNA4O00629 521 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ABCB7O75027 752 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 CNTN5O94779 1100 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 SF3B4Q15427 424 aaKnown RBP eCLIP13.48□□□□□ -0.252e-8■■■■■ 29.2
PCNX3-202ENST00000439247 TMEM236Q5W0B7 351 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 LINC00523Q86TU6 105 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 EXOC8Q8IYI6 725 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 CLYBLQ8N0X4 340 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 BEST2Q8NFU1 509 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 EMID1Q96A84 441 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 UBXN10Q96LJ8 280 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 SLC2A13Q96QE2 648 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ZNF347Q96SE7 839 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 TUBA1CQ9BQE3 449 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 COLEC11Q9BWP8 271 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 MROQ9BYG7 248 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 TOR3AQ9H497 397 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ZNF236Q9UL36 1845 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 MIA3Q5JRA6 1907 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 UPK1AO00322 258 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 HLA-DQB2P05538 268 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 GPIP06744 558 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 PRDX3P30048 256 aaKnown RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 TGFBR1P36897 503 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 FLT3LGP49771 235 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ARSDP51689 593 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 ARSFP54793 590 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 SELPLGQ14242 412 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 TIGD2Q4W5G0 525 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 SLCO6A1Q86UG4 719 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 OR6P1Q8NGX9 317 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 NDNFQ8TB73 568 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 WDCPQ9H6R7 721 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 GPN2Q9H9Y4 310 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 PALMDQ9NP74 551 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 SEMA4BQ9NPR2 832 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 POLR3BQ9NW08 1133 aaPredicted RBP13.48□□□□□ -0.25
PCNX3-202ENST00000439247 PCDHB3Q9Y5E6 796 aa13.48□□□□□ -0.25
PCNX3-202ENST00000439247 NCAM2O15394 837 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 LGALS2P05162 132 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 MAXP61244 160 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 BCL2A1Q16548 175 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 DUSP28Q4G0W2 176 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 PAGE2BQ5JRK9 111 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 BLOC1S3Q6QNY0 202 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 RBM23Q86U06 439 aaKnown RBP13.47□□□□□ -0.25
PCNX3-202ENST00000439247 COLGALT2Q8IYK4 626 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 TRPV1Q8NER1 839 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 STARD8Q92502 1023 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 TRIB2Q92519 343 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 RNF34Q969K3 372 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 ESAMQ96AP7 390 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 PABPC5Q96DU9 382 aaKnown RBP13.47□□□□□ -0.25
PCNX3-202ENST00000439247 MRGPRX2Q96LB1 330 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 ATP13A3Q9H7F0 1226 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 CARS2Q9HA77 564 aaKnown RBP13.47□□□□□ -0.25
PCNX3-202ENST00000439247 GLOD4Q9HC38 313 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 PAK1IP1Q9NWT1 392 aaPredicted RBP13.47□□□□□ -0.25
PCNX3-202ENST00000439247 MTRRQ9UBK8 725 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 TSC2P49815 1807 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 ZBBXA8MT70 800 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 BBIP1A8MTZ0 92 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 C1RP00736 705 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 KPNA2P52292 529 aaKnown RBP13.47□□□□□ -0.25
PCNX3-202ENST00000439247 OR4D1Q15615 310 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 IQSEC1Q6DN90 963 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 DCP1BQ8IZD4 617 aaKnown RBP13.47□□□□□ -0.25
PCNX3-202ENST00000439247 OR6J1Q8NGC5 347 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 RNF186Q9NXI6 227 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 INVSQ9Y283 1065 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 TMED5Q9Y3A6 229 aa13.47□□□□□ -0.25
PCNX3-202ENST00000439247 AZIN1O14977 448 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 LSM1O15116 133 aaKnown RBP13.46□□□□□ -0.25
PCNX3-202ENST00000439247 CAPN15O75808 1086 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 MYO1DO94832 1006 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 RBP1P09455 135 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 PRKACGP22612 351 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 TPTEP56180 551 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 MTPNP58546 118 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 WSCD1Q658N2 575 aa13.46□□□□□ -0.25
PCNX3-202ENST00000439247 TBC1D21Q8IYX1 336 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms