RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 SETD6Q8TBK2 473 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 KCNE4Q8WWG9 221 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 TNFRSF14Q92956 283 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 ISG20Q96AZ6 181 aaKnown RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 METTL2AQ96IZ6 378 aaKnown RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 SLC41A2Q96JW4 573 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 NSMCE2Q96MF7 247 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 PTCHD1Q96NR3 888 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 ABHD1Q96SE0 405 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 RBM4BQ9BQ04 359 aaKnown RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 RBM4Q9BWF3 364 aaKnown RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 NAPBQ9H115 298 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 MIR1-1HGQ9H1L0 117 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 EPB41L5Q9HCM4 733 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 MBNL1Q9NR56 388 aaKnown RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 GJB4Q9NTQ9 266 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 RNF146Q9NTX7 359 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 HCFC1R1Q9NWW0 138 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 CNIH4Q9P003 139 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 MRPL15Q9P015 296 aaKnown RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 ATXN7L1Q9ULK2 861 aaPredicted RBP5.53□□□□□ -1.52
RFC3-202ENST00000434425 SOX13Q9UN79 622 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 DTX4Q9Y2E6 619 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 BTBD3Q9Y2F9 522 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 STARD13Q9Y3M8 1113 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 SPTBN4Q9H254 2564 aa5.53□□□□□ -1.52
RFC3-202ENST00000434425 MYH7BA7E2Y1 1941 aa5.52□□□□□ -1.52
RFC3-202ENST00000434425 A0A088AWK7 358 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 LOC390937A0A1W2PQ73 354 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 TMEM120BA0PK00 339 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 WDR64B1ANS9 1081 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 SPECC1L-ADORA2AF8WAN1 911 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 H3BM21 787 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 RASGRF2O14827 1237 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 EIF3DO15371 548 aaKnown RBP eCLIP5.52□□□□□ -1.53
RFC3-202ENST00000434425 NDUFS2O75306 463 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 PAGE1O75459 146 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 HEXIM1O94992 359 aaKnown RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 SNAPINO95295 136 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 SIX3O95343 332 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 TGM6O95932 706 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 BMP15O95972 392 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 IGHEP01854 428 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 KRT6BP04259 564 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 IL6P05231 212 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 CNPP09543 421 aaKnown RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 ETS1P14921 441 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ZNF18P17022 549 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 CPT2P23786 658 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 AOAHP28039 575 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 CCND2P30279 289 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 AVPR2P30518 371 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 GCH1P30793 250 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 MAT2AP31153 395 aaKnown RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 CAPZA2P47755 286 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 KRT6CP48668 564 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 KHKP50053 298 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 NPY4RP50391 375 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 TOB1P50616 345 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 STAT2P52630 851 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 SOX4Q06945 474 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 SF3B4Q15427 424 aaKnown RBP eCLIP5.52□□□□□ -1.53
RFC3-202ENST00000434425 STILQ15468 1287 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 KYAT1Q16773 422 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 PCGF3Q3KNV8 242 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ANKRD20A4Q4UJ75 823 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 TMEM119Q4V9L6 283 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ANKRD20A8PQ5CZ79 823 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 C9orf152Q5JTZ5 239 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 AARS2Q5JTZ9 985 aaKnown RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 ANKRD20A2Q5SQ80 823 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 TEX35Q5T0J7 233 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ANKRD20A1Q5TYW2 823 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ANKRD20A3Q5VUR7 823 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ZNF385CQ66K41 422 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 E4F1Q66K89 784 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 ARMCX5Q6P1M9 558 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 AFTPHQ6ULP2 937 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 MSANTD1Q6ZTZ1 278 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 C1orf186Q6ZWK4 172 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 KCTD1Q719H9 257 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 EFL1Q7Z2Z2 1120 aaKnown RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 AMZ2Q86W34 360 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 VSTM4Q8IW00 320 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 APLFQ8IW19 511 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 MLKLQ8NB16 471 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 CFAP61Q8NHU2 1237 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 METTL6Q8TCB7 284 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 LRRC8CQ8TDW0 803 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 CCDC12Q8WUD4 166 aaPredicted RBP5.52□□□□□ -1.53
RFC3-202ENST00000434425 CHURC1Q8WUH1 139 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 AFG1LQ8WV93 481 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 CPA5Q8WXQ8 436 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 TANKQ92844 425 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 FBXO32Q969P5 355 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 MAGED4Q96JG8 741 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 ELMO2Q96JJ3 720 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 OPALINQ96PE5 141 aa5.52□□□□□ -1.53
RFC3-202ENST00000434425 GAL3ST4Q96RP7 486 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms