RNA–Protein interactions for RNA: ENST00000430570.5

CPNE1-212, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-212ENST00000430570 TCEA2Q15560 299 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 SKIDA1Q1XH10 827 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 PRRT3Q5FWE3 981 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 MAATS1Q7Z4T9 603 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 PCGF5Q86SE9 256 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 AGGF1Q8N302 714 aaeCLIP24.9■■□□□ 1.58
CPNE1-212ENST00000430570 ZNF548Q8NEK5 533 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-212ENST00000430570 PPHLN1Q8NEY8 458 aaKnown RBP24.9■■□□□ 1.58
CPNE1-212ENST00000430570 LMX1AQ8TE12 382 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 SCARF2Q96GP6 870 aaPredicted RBP24.9■■□□□ 1.58
CPNE1-212ENST00000430570 SLC13A1Q9BZW2 595 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 CLPBQ9H078 707 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 TRIM39Q9HCM9 518 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 ATXN10Q9UBB4 475 aa24.9■■□□□ 1.58
CPNE1-212ENST00000430570 PLXNB3Q9ULL4 1909 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 TP73O15350 636 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 PRSS56P0CW18 603 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 GIMD1P0DJR0 217 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 MAGEA3P43357 314 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 GNPDA1P46926 289 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 CDKN1CP49918 316 aaPredicted RBP24.89■■□□□ 1.58
CPNE1-212ENST00000430570 BLKP51451 505 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 ITGA9Q13797 1035 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 ADGRG6Q86SQ4 1221 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 SETD7Q8WTS6 366 aaKnown RBP24.89■■□□□ 1.58
CPNE1-212ENST00000430570 TMEM168Q9H0V1 697 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 CARS2Q9HA77 564 aaKnown RBP24.89■■□□□ 1.58
CPNE1-212ENST00000430570 XAB2Q9HCS7 855 aaKnown RBP24.89■■□□□ 1.58
CPNE1-212ENST00000430570 SPASTQ9UBP0 616 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 RIMKLBQ9ULI2 386 aa24.89■■□□□ 1.58
CPNE1-212ENST00000430570 CCDC162PA2VCL2 907 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 OR51F1A6NGY5 319 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 DNAJC6O75061 913 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 SEC31AO94979 1220 aaKnown RBP24.88■■□□□ 1.57
CPNE1-212ENST00000430570 IVLP07476 585 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 ZNF8P17098 575 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-212ENST00000430570 NMBRP28336 390 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 ITGA8P53708 1063 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 ACVR1Q04771 509 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 NFATC2Q13469 925 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 LAMB3Q13751 1172 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 HIBCHQ6NVY1 386 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-212ENST00000430570 CES3Q6UWW8 571 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 PIP4P1Q86T03 277 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 HOOK3Q86VS8 718 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 PHYKPLQ8IUZ5 450 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 HDAC10Q969S8 669 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 SNF8Q96H20 258 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 PWWP2AQ96N64 755 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 ERP44Q9BS26 406 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 KIFC1Q9BW19 673 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 OR2AG1Q9H205 316 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 PRKAB1Q9Y478 270 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 CEP250Q9BV73 2442 aa24.88■■□□□ 1.57
CPNE1-212ENST00000430570 AGAP14A8MT82 685 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 AQP9O43315 295 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 CTSEP14091 401 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 MORF4L2Q15014 288 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 PYCR3Q53H96 274 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 FNBP1LQ5T0N5 605 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 GPRC6AQ5T6X5 926 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 NLRP9Q7RTR0 991 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 SNX20Q7Z614 316 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 NAXDQ8IW45 347 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 EID2Q8N6I1 236 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 CCL4L1Q8NHW4 92 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 GDAP1Q8TB36 358 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 RHBDD1Q8TEB9 315 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 TRIM56Q9BRZ2 755 aaKnown RBP24.87■■□□□ 1.57
CPNE1-212ENST00000430570 DPH5Q9H2P9 285 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 TREX1Q9NSU2 369 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 SMOXQ9NWM0 555 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 VPS18Q9P253 973 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 SOX13Q9UN79 622 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 PLEKHM1Q9Y4G2 1056 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 SLC30A1Q9Y6M5 507 aa24.87■■□□□ 1.57
CPNE1-212ENST00000430570 SDR42E2A6NKP2 422 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 FFAR2O15552 330 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 FLRT2O43155 660 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 ZRANB3Q5FWF4 1079 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 DUPD1Q68J44 220 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 PNPLA1Q8N8W4 532 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 DEFB124Q8NES8 71 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 MFSD3Q96ES6 412 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 CCDC97Q96F63 343 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-212ENST00000430570 SIGLEC10Q96LC7 697 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 LRRC1Q9BTT6 524 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 MRM3Q9HC36 420 aaKnown RBP24.86■■□□□ 1.57
CPNE1-212ENST00000430570 DLL3Q9NYJ7 618 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 ST14Q9Y5Y6 855 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 ARID1BQ8NFD5 2236 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-212ENST00000430570 TRIM38O00635 465 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 NUAK1O60285 661 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 CBFA2T3O75081 653 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 BANF1O75531 89 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 GOT2P00505 430 aaKnown RBP24.86■■□□□ 1.57
CPNE1-212ENST00000430570 ITGALP20701 1170 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 TMEM115Q12893 351 aaPredicted RBP24.86■■□□□ 1.57
CPNE1-212ENST00000430570 MSS51Q4VC12 460 aa24.86■■□□□ 1.57
CPNE1-212ENST00000430570 PSAPL1Q6NUJ1 521 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms