RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 OR4L1Q8NH43 312 aa7.2□□□□□ -1.26
CNOT4-206ENST00000428680 RLN3Q8WXF3 142 aa7.2□□□□□ -1.26
CNOT4-206ENST00000428680 FAM84AQ96KN4 292 aa7.2□□□□□ -1.26
CNOT4-206ENST00000428680 DDX18Q9NVP1 670 aaKnown RBP7.2□□□□□ -1.26
CNOT4-206ENST00000428680 SNX7Q9UNH6 387 aa7.2□□□□□ -1.26
CNOT4-206ENST00000428680 GYG2O15488 501 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 AKAP10O43572 662 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 DNAJC8O75937 253 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 HAUS5O94927 633 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 PRAMEF1O95521 474 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MT-CYBP00156 380 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 THEGLP0DJG4 465 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 KCNE1P15382 129 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 RPL3P39023 403 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CLCNKAP51800 687 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 SELENOVP59797 346 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CUL3Q13618 768 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ELAVL3Q14576 367 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 LAIR1Q6GTX8 287 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ZSWIM2Q8NEG5 633 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 HDAC10Q969S8 669 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 TAPBPLQ9BX59 468 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 SLC29A3Q9BZD2 475 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 DPEP3Q9H4B8 488 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 RAD21L1Q9H4I0 556 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CWH43Q9H720 699 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CCDC177Q9NQR7 707 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 POU2F3Q9UKI9 436 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MAPRE3Q9UPY8 281 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ATXN2Q99700 1313 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CAPN8A6NHC0 703 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 GFRA3O60609 400 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 IL12BP29460 328 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 OAS2P29728 719 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MAGEA11P43364 429 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 KCNQ1P51787 676 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MRPS22P82650 360 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CDK16Q00536 496 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 POMZP3Q6PJE2 187 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 RHBDF2Q6PJF5 856 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ERN2Q76MJ5 926 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CDYL2Q8N8U2 506 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 PNPLA8Q9NP80 782 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 IMPAD1Q9NX62 359 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 SCHIP1Q9P0W5 487 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 DCDC2Q9UHG0 476 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 PCDHGC5Q9Y5F6 944 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 OAS3Q9Y6K5 1087 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MORC2Q9Y6X9 1032 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 IGLV3-22A0A075B6J6 115 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 SLC28A1O00337 649 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 RGS14O43566 566 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 WDR47O94967 919 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 LDOC1O95751 146 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 CST3P01034 146 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 NR1D1P20393 614 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 KDELR1P24390 212 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 PGDP52209 483 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MBTPS1Q14703 1052 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ZNF542PQ5EBM4 170 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 PRAMEF14Q5SWL7 426 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 DUPD1Q68J44 220 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 SPATA4Q8NEY3 305 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ADCY4Q8NFM4 1077 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 OR52K1Q8NGK4 314 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 RAB7BQ96AH8 199 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 FAM120BQ96EK7 910 aaKnown RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ZNF670Q9BS34 389 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 IRX2Q9BZI1 471 aaPredicted RBP7.19□□□□□ -1.26
CNOT4-206ENST00000428680 PCBD2Q9H0N5 130 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 GLOD4Q9HC38 313 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 MTRRQ9UBK8 725 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 SNX12Q9UMY4 172 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 KCNK6Q9Y257 313 aa7.19□□□□□ -1.26
CNOT4-206ENST00000428680 ILVBLA1L0T0 632 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 YJEFN3A6XGL0 299 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 UPK3BL1B0FP48 263 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 UPK3BL2E5RIL1 263 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 E7ENQ6 273 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 HNRNPRO43390 633 aaKnown RBP7.18□□□□□ -1.26
CNOT4-206ENST00000428680 LILRB3O75022 631 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 IL9P15248 144 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 EPORP19235 508 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 POU1F1P28069 291 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 HOXA6P31267 233 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 NAE1Q13564 534 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 SPANXN3Q5MJ09 141 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 PDSS1Q5T2R2 415 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 TRIM68Q6AZZ1 485 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 SLC26A9Q7LBE3 791 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 TMPRSS11BQ86T26 416 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 TREML1Q86YW5 311 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 PLXDC1Q8IUK5 500 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 CEP76Q8TAP6 659 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 ANKRD49Q8WVL7 239 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 CRYGNQ8WXF5 182 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 PPP1R10Q96QC0 940 aaKnown RBP7.18□□□□□ -1.26
CNOT4-206ENST00000428680 MAP3K3Q99759 626 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 PISDQ9UG56 409 aa7.18□□□□□ -1.26
CNOT4-206ENST00000428680 WARS2Q9UGM6 360 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms