RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.22■□□□□ 0.51
PSPC1-202ENST00000427943 ATXN10Q9UBB4 475 aa18.22■□□□□ 0.51
PSPC1-202ENST00000427943 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.22■□□□□ 0.51
PSPC1-202ENST00000427943 SDK2Q58EX2 2172 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 IGHV1OR21-1A0A087WYE8 117 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 EIF4E1BA6NMX2 242 aaKnown RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 SLC25A14O95258 325 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF8P17098 575 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 BPIP17213 487 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CSF2RBP32927 897 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CHRNA4P43681 627 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 GPR3P46089 330 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 PPM1FP49593 454 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 MAPK10P53779 464 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 WNT3AP56704 352 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 PLA2G4EQ3MJ16 856 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CCDC70Q6NSX1 233 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CRTC3Q6UUV7 619 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 KDELC1Q6UW63 502 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 ZNF574Q6ZN55 896 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 PID1Q7Z2X4 250 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 SFRP1Q8N474 314 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 TRAM1L1Q8N609 369 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CCDC74BQ96LY2 380 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CMKLR1Q99788 373 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 HERPUD2Q9BSE4 406 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 ZSCAN5AQ9BUG6 496 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 OR2AG1Q9H205 316 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 CARD9Q9H257 536 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 C10orf88Q9H8K7 445 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 RMI1Q9H9A7 625 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 BPIFA1Q9NP55 256 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 TMEM9Q9P0T7 183 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 NFKBIL1Q9UBC1 381 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 TBC1D29Q9UFV1 150 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 FAM153AQ9UHL3 310 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 PCDHGA7Q9Y5G6 932 aa18.21■□□□□ 0.51
PSPC1-202ENST00000427943 EPN1Q9Y6I3 576 aaPredicted RBP18.21■□□□□ 0.51
PSPC1-202ENST00000427943 PRAMEF33A0A0G2JMD5 474 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 IGHV5-10-1A0A0J9YXX1 117 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 TEX51A0A1B0GUA7 166 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 ZW10O43264 779 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 MTSS1O43312 755 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 GRID2O43424 1007 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 NUAK1O60285 661 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 SNX2O60749 519 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 PRAMEF10O60809 474 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 MTX2O75431 263 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 PRB1P04280 392 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 FECHP22830 423 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 PPP2R5EQ16537 467 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 RAD9BQ6WBX8 426 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 BBS12Q6ZW61 710 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 PHYKPLQ8IUZ5 450 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 SLC25A41Q8N5S1 370 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 ACRBPQ8NEB7 543 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 HTR3CQ8WXA8 447 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 GLYATL1Q969I3 302 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 TMEM159Q96B96 161 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 OXNAD1Q96HP4 312 aaPredicted RBP18.2■□□□□ 0.5
PSPC1-202ENST00000427943 RAD18Q9NS91 495 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 REXO2Q9Y3B8 237 aaKnown RBP18.2■□□□□ 0.5
PSPC1-202ENST00000427943 DUSP10Q9Y6W6 482 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 ATMQ13315 3056 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 AHCTF1Q8WYP5 2266 aa18.2■□□□□ 0.5
PSPC1-202ENST00000427943 SMG1Q96Q15 3661 aaKnown RBP18.2■□□□□ 0.5
PSPC1-202ENST00000427943 MACROD2A1Z1Q3 448 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 H7C0C1 242 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 ATXN7O15265 892 aaPredicted RBP18.19■□□□□ 0.5
PSPC1-202ENST00000427943 IPO7O95373 1038 aaKnown RBP18.19■□□□□ 0.5
PSPC1-202ENST00000427943 CCL4P13236 92 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 MPSTP25325 297 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 CTNNA1P35221 906 aaKnown RBP18.19■□□□□ 0.5
PSPC1-202ENST00000427943 FASLGP48023 281 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 ATP5OP48047 213 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 NAP1L1P55209 391 aaKnown RBP18.19■□□□□ 0.5
PSPC1-202ENST00000427943 HHEXQ03014 270 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 CFHR1Q03591 330 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 VAC14Q08AM6 782 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 NFATC2Q13469 925 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 TGIF1Q15583 401 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 SIRPB2Q5JXA9 342 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 CCDC181Q5TID7 509 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 ADGRG6Q86SQ4 1221 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 GAS2L3Q86XJ1 694 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 TMTC1Q8IUR5 882 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 IPMKQ8NFU5 416 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 USP7Q93009 1102 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 MRGPRX2Q96LB1 330 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 FCRL5Q96RD9 977 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 SLC38A3Q99624 504 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 OSGEPL1Q9H4B0 414 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 FOXJ2Q9P0K8 574 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 RSPH14Q9UHP6 348 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 SSUH2Q9Y2M2 353 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 ADGRG1Q9Y653 693 aa18.19■□□□□ 0.5
PSPC1-202ENST00000427943 LOC285095A0A1B0GVY8 99 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 A6NCN8 305 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 HACD1B0YJ81 288 aa18.18■□□□□ 0.5
PSPC1-202ENST00000427943 APOC4-APOC2K7ER74 178 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms