RNA–Protein interactions for RNA: ENST00000426447.3

PDAP1-202, Transcript of PDGFA associated protein 1, humanhuman

TSL 5

Gene PDAP1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-202ENST00000426447 EIF2S3LQ2VIR3 472 aaKnown RBP14.48□□□□□ -0.09
PDAP1-202ENST00000426447 NADK2Q4G0N4 442 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 PPP1R3BQ86XI6 285 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 PSTKQ8IV42 348 aaKnown RBP14.48□□□□□ -0.09
PDAP1-202ENST00000426447 ATPAF2Q8N5M1 289 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.48□□□□□ -0.09
PDAP1-202ENST00000426447 ARFGAP1Q8N6T3 406 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 SEC14L1Q92503 715 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 PLEKHG4BQ96PX9 1271 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 SLC25A23Q9BV35 468 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 TRIM55Q9BYV6 548 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 OSGEPL1Q9H4B0 414 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 NT5MQ9NPB1 228 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 RCOR3Q9P2K3 495 aaPredicted RBP14.48□□□□□ -0.09
PDAP1-202ENST00000426447 MAP4K5Q9Y4K4 846 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 PCDHGA6Q9Y5G7 932 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 MYO9AB2RTY4 2548 aa14.48□□□□□ -0.09
PDAP1-202ENST00000426447 A0A0J9YYE9 177 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 CLDN7O95471 211 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 TRBC1P01850 177 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 CCDC172P0C7W6 258 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 COL8A1P27658 744 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 CCL11P51671 97 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 STC1P52823 247 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 KRT31Q15323 416 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 CACHD1Q5VU97 1274 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 ZNF787Q6DD87 383 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 CYB5D1Q6P9G0 228 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 TMEM26Q6ZUK4 368 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 PRR7Q8TB68 274 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 CT55Q8WUE5 264 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 THAP4Q8WY91 577 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 ACTL8Q9H568 366 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 ZNF768Q9H5H4 540 aaKnown RBP14.47□□□□□ -0.09
PDAP1-202ENST00000426447 PDE7BQ9NP56 450 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 LHX9Q9NQ69 397 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 ACSS2Q9NR19 701 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 KLC4Q9NSK0 619 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 DNPEPQ9ULA0 475 aa14.47□□□□□ -0.09
PDAP1-202ENST00000426447 TMEM191CA6NGB0 347 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 C21orf140B9A014 251 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 ATMINO43313 823 aaPredicted RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 FZD6O60353 706 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 RNF224P0DH78 156 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 FGF5P12034 268 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 XRCC1P18887 633 aaPredicted RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 LEPRP48357 1165 aaKnown RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 INPP5JQ15735 1006 aaPredicted RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 PPP1R2P3Q6NXS1 205 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 ZDHHC12Q96GR4 267 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 POLR1EQ9GZS1 481 aaKnown RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 FAM83DQ9H4H8 585 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 UCK1Q9HA47 277 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 SLAMF7Q9NQ25 335 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 ETNK2Q9NVF9 386 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 OGFRQ9NZT2 677 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 CNOT6Q9ULM6 557 aaKnown RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 CHKBQ9Y259 395 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 SIK3Q9Y2K2 1263 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 SLC30A1Q9Y6M5 507 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 ICE1Q9Y2F5 2266 aa14.46□□□□□ -0.09
PDAP1-202ENST00000426447 USP9XQ93008 2570 aaPredicted RBP14.46□□□□□ -0.09
PDAP1-202ENST00000426447 ARGFXA6NJG6 315 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 KIF1CO43896 1103 aaKnown RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 NUAK1O60285 661 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 LRCH4O75427 683 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 FERP16591 822 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 SERPINB6P35237 376 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 RPS15P62841 145 aaKnown RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 UBE2IP63279 158 aaKnown RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 CHAF1BQ13112 559 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 CT47A1Q5JQC4 288 aaPredicted RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 PLEKHA7Q6IQ23 1121 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 IRGCQ6NXR0 463 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 FAM92BQ6ZTR7 304 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 MAMDC2Q7Z304 686 aaPredicted RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 RAVER1Q8IY67 606 aaKnown RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 AOPEPQ8N6M6 819 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 CCHCR1Q8TD31 782 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 HSPH1Q92598 858 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 GPR87Q9BY21 358 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 SLC29A3Q9BZD2 475 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 CARD9Q9H257 536 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 CLSTN2Q9H4D0 955 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 TAS2R14Q9NYV8 317 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 PKD2L2Q9NZM6 624 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 TTLL3Q9Y4R7 772 aa14.45□□□□□ -0.1
PDAP1-202ENST00000426447 PCDHGA9Q9Y5G4 932 aaKnown RBP14.45□□□□□ -0.1
PDAP1-202ENST00000426447 C1orf232A0A0U1RR37 186 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 GOLGA6L3A6NEY3 463 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 PDZK1P1A8MUH7 402 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 FADS2P1A8MWK0 482 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 TCP11X1B4DZS4 312 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 MTA2O94776 668 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 CA4P22748 312 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 SLC19A1P41440 591 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 PDE1BQ01064 536 aa14.44□□□□□ -0.1
PDAP1-202ENST00000426447 MRPL49Q13405 166 aaKnown RBP14.44□□□□□ -0.1
PDAP1-202ENST00000426447 SEPT7Q16181 437 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms