RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NECTIN4Q96NY8 510 aa15.08■□□□□ 0.01
ACTB-204ENST00000425660 RPP25Q9BUL9 199 aaKnown RBP15.08■□□□□ 0.01
ACTB-204ENST00000425660 TFB2MQ9H5Q4 396 aaKnown RBP15.08■□□□□ 0.01
ACTB-204ENST00000425660 THAP10Q9P2Z0 257 aaPredicted RBP15.08■□□□□ 0.01
ACTB-204ENST00000425660 H3BMM5 538 aa15.08■□□□□ 0
ACTB-204ENST00000425660 ZBTB14O43829 449 aa15.08■□□□□ 0
ACTB-204ENST00000425660 NIPSNAP2O75323 286 aa15.08■□□□□ 0
ACTB-204ENST00000425660 IPO13O94829 963 aaKnown RBP15.08■□□□□ 0
ACTB-204ENST00000425660 SNUPNO95149 360 aaKnown RBP15.08■□□□□ 0
ACTB-204ENST00000425660 KAT7O95251 611 aa15.08■□□□□ 0
ACTB-204ENST00000425660 TSPAN12O95859 305 aa15.08■□□□□ 0
ACTB-204ENST00000425660 ALOX15P16050 662 aaPredicted RBP15.08■□□□□ 0
ACTB-204ENST00000425660 UGT1A6P19224 532 aa15.08■□□□□ 0
ACTB-204ENST00000425660 UGT1A1P22309 533 aa15.08■□□□□ 0
ACTB-204ENST00000425660 UGT1A4P22310 534 aa15.08■□□□□ 0
ACTB-204ENST00000425660 UGT1A3P35503 534 aa15.08■□□□□ 0
ACTB-204ENST00000425660 UGT1A5P35504 534 aa15.08■□□□□ 0
ACTB-204ENST00000425660 SERPINB5P36952 375 aa15.08■□□□□ 0
ACTB-204ENST00000425660 GRIA2P42262 883 aa15.08■□□□□ 0
ACTB-204ENST00000425660 KCNC1P48547 511 aa15.08■□□□□ 0
ACTB-204ENST00000425660 CLCN7P51798 805 aa15.08■□□□□ 0
ACTB-204ENST00000425660 NAGLUP54802 743 aa15.08■□□□□ 0
ACTB-204ENST00000425660 ATP6V0D1P61421 351 aa15.08■□□□□ 0
ACTB-204ENST00000425660 RALGDSQ12967 914 aa15.08■□□□□ 0
ACTB-204ENST00000425660 HSF5Q4G112 596 aaPredicted RBP15.08■□□□□ 0
ACTB-204ENST00000425660 LRRC73Q5JTD7 316 aa15.08■□□□□ 0
ACTB-204ENST00000425660 SPDYAQ5MJ70 313 aa15.08■□□□□ 0
ACTB-204ENST00000425660 UGT3A1Q6NUS8 523 aa15.08■□□□□ 0
ACTB-204ENST00000425660 DPPA4Q7L190 304 aa15.08■□□□□ 0
ACTB-204ENST00000425660 TTC7BQ86TV6 843 aa15.08■□□□□ 0
ACTB-204ENST00000425660 WDR75Q8IWA0 830 aaKnown RBP15.08■□□□□ 0
ACTB-204ENST00000425660 RAVER1Q8IY67 606 aaKnown RBP15.08■□□□□ 0
ACTB-204ENST00000425660 GIMAP7Q8NHV1 300 aa15.08■□□□□ 0
ACTB-204ENST00000425660 LRRC37BQ96QE4 947 aa15.08■□□□□ 0
ACTB-204ENST00000425660 TMEM120AQ9BXJ8 343 aa15.08■□□□□ 0
ACTB-204ENST00000425660 CLPBQ9H078 707 aa15.08■□□□□ 0
ACTB-204ENST00000425660 CDH19Q9H159 772 aa15.08■□□□□ 0
ACTB-204ENST00000425660 STN1Q9H668 368 aaKnown RBP15.08■□□□□ 0
ACTB-204ENST00000425660 ALG9Q9H6U8 611 aa15.08■□□□□ 0
ACTB-204ENST00000425660 SMOXQ9NWM0 555 aa15.08■□□□□ 0
ACTB-204ENST00000425660 PKD2L2Q9NZM6 624 aa15.08■□□□□ 0
ACTB-204ENST00000425660 CRLS1Q9UJA2 301 aa15.08■□□□□ 0
ACTB-204ENST00000425660 SARDHQ9UL12 918 aa15.08■□□□□ 0
ACTB-204ENST00000425660 HCN2Q9UL51 889 aa15.08■□□□□ 0
ACTB-204ENST00000425660 DNAJC16Q9Y2G8 782 aa15.08■□□□□ 0
ACTB-204ENST00000425660 IGLV3-16A0A075B6K0 115 aa15.07■□□□□ 0
ACTB-204ENST00000425660 TMEM265A0A087WTH1 108 aa15.07■□□□□ 0
ACTB-204ENST00000425660 RGSL1A5PLK6 1076 aa15.07■□□□□ 0
ACTB-204ENST00000425660 GOLGA8CPA6NN73 597 aa15.07■□□□□ 0
ACTB-204ENST00000425660 A8MT66 165 aa15.07■□□□□ 0
ACTB-204ENST00000425660 KCNA5P22460 613 aa15.07■□□□□ 0
ACTB-204ENST00000425660 ITGB7P26010 798 aa15.07■□□□□ 0
ACTB-204ENST00000425660 MMP12P39900 470 aa15.07■□□□□ 0
ACTB-204ENST00000425660 ENPP2Q13822 863 aa15.07■□□□□ 0
ACTB-204ENST00000425660 RCN2Q14257 317 aa15.07■□□□□ 0
ACTB-204ENST00000425660 SPRED3Q2MJR0 410 aa15.07■□□□□ 0
ACTB-204ENST00000425660 LRIT3Q3SXY7 679 aa15.07■□□□□ 0
ACTB-204ENST00000425660 SERPINA13PQ6UXR4 307 aa15.07■□□□□ 0
ACTB-204ENST00000425660 MACC1Q6ZN28 852 aa15.07■□□□□ 0
ACTB-204ENST00000425660 PARS2Q7L3T8 475 aaKnown RBP15.07■□□□□ 0
ACTB-204ENST00000425660 SLC22A9Q8IVM8 553 aa15.07■□□□□ 0
ACTB-204ENST00000425660 OR8D1Q8WZ84 308 aa15.07■□□□□ 0
ACTB-204ENST00000425660 SUSD6Q92537 303 aa15.07■□□□□ 0
ACTB-204ENST00000425660 KIAA1191Q96A73 305 aa15.07■□□□□ 0
ACTB-204ENST00000425660 FAM136AQ96C01 138 aa15.07■□□□□ 0
ACTB-204ENST00000425660 CCDC97Q96F63 343 aaPredicted RBP15.07■□□□□ 0
ACTB-204ENST00000425660 SLC30A3Q99726 388 aa15.07■□□□□ 0
ACTB-204ENST00000425660 BOCQ9BWV1 1114 aa15.07■□□□□ 0
ACTB-204ENST00000425660 TTYH1Q9H313 450 aaPredicted RBP15.07■□□□□ 0
ACTB-204ENST00000425660 NCKIPSDQ9NZQ3 722 aa15.07■□□□□ 0
ACTB-204ENST00000425660 GALPQ9UBC7 116 aa15.07■□□□□ 0
ACTB-204ENST00000425660 TRMT6Q9UJA5 497 aaKnown RBP15.07■□□□□ 0
ACTB-204ENST00000425660 GNPTGQ9UJJ9 305 aa15.07■□□□□ 0
ACTB-204ENST00000425660 SLC12A4Q9UP95 1085 aa15.07■□□□□ 0
ACTB-204ENST00000425660 DHRS7Q9Y394 339 aa15.07■□□□□ 0
ACTB-204ENST00000425660 ANHXE9PGG2 379 aa15.06■□□□□ 0
ACTB-204ENST00000425660 H0Y858 1186 aa15.06■□□□□ 0
ACTB-204ENST00000425660 NPHS1O60500 1241 aa15.06■□□□□ 0
ACTB-204ENST00000425660 HLA-EP13747 358 aa15.06■□□□□ 0
ACTB-204ENST00000425660 CHRM3P20309 590 aa15.06■□□□□ 0
ACTB-204ENST00000425660 NSG1P42857 185 aa15.06■□□□□ 0
ACTB-204ENST00000425660 SETDB1Q15047 1291 aa15.06■□□□□ 0
ACTB-204ENST00000425660 ATP13A5Q4VNC0 1218 aa15.06■□□□□ 0
ACTB-204ENST00000425660 RFLNAQ6ZTI6 216 aa15.06■□□□□ 0
ACTB-204ENST00000425660 SIDT2Q8NBJ9 832 aaKnown RBP15.06■□□□□ 0
ACTB-204ENST00000425660 SKA1Q96BD8 255 aa15.06■□□□□ 0
ACTB-204ENST00000425660 ULK4Q96C45 1275 aa15.06■□□□□ 0
ACTB-204ENST00000425660 PDLIM5Q96HC4 596 aaKnown RBP15.06■□□□□ 0
ACTB-204ENST00000425660 ATOH8Q96SQ7 321 aa15.06■□□□□ 0
ACTB-204ENST00000425660 FAM129BQ96TA1 746 aa15.06■□□□□ 0
ACTB-204ENST00000425660 RAD18Q9NS91 495 aa15.06■□□□□ 0
ACTB-204ENST00000425660 MARCOQ9UEW3 520 aaPredicted RBP15.06■□□□□ 0
ACTB-204ENST00000425660 RRP15Q9Y3B9 282 aaKnown RBP15.06■□□□□ 0
ACTB-204ENST00000425660 NEMP2A6NFY4 417 aa15.06■□□□□ 0
ACTB-204ENST00000425660 E5RI56 91 aa15.06■□□□□ 0
ACTB-204ENST00000425660 F8W8V4 182 aa15.06■□□□□ 0
ACTB-204ENST00000425660 PSMD11O00231 422 aa15.06■□□□□ 0
ACTB-204ENST00000425660 ZNF195O14628 629 aa15.06■□□□□ 0
ACTB-204ENST00000425660 KERAO60938 352 aa15.06■□□□□ 0
ACTB-204ENST00000425660 HSPA4LO95757 839 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms