RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 KIAA1191Q96A73 305 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 SLC7A6OSQ96CW6 309 aaPredicted RBP26.3■■□□□ 1.8
LDB1-202ENST00000425280 ATOH8Q96SQ7 321 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 GDF15Q99988 308 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 BOCQ9BWV1 1114 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 ELOVL2Q9NXB9 296 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 IKZF3Q9UKT9 509 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 IQCF5A8MTL0 148 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 SMIM24O75264 130 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 CTSLP07711 333 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 NQO1P15559 274 aaKnown RBP26.3■■□□□ 1.8
LDB1-202ENST00000425280 ZNF7P17097 686 aaPredicted RBP26.3■■□□□ 1.8
LDB1-202ENST00000425280 RPS3P23396 243 aaKnown RBP eCLIP26.3■■□□□ 1.86e-6■□□□□ 8.7
LDB1-202ENST00000425280 ACRV1P26436 265 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 HK2P52789 917 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 ATP6V0D1P61421 351 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 HYAL1Q12794 435 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 EXT2Q93063 718 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 TTC1Q99614 292 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 LRMDAQ9H2I8 198 aa26.3■■□□□ 1.8
LDB1-202ENST00000425280 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.3■■□□□ 1.8
LDB1-202ENST00000425280 CAPN14A8MX76 684 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 E5RI56 91 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 TSPAN12O95859 305 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 C1SP09871 688 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 IMPDH1P20839 514 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 GPR33Q49SQ1 333 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 LYPLAL1Q5VWZ2 237 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 TANGO2Q6ICL3 276 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 RFLNAQ6ZTI6 216 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 RBFAQ8N0V3 343 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 ZNF366Q8N895 744 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 PBXIP1Q96AQ6 731 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 NSL1Q96IY1 281 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 TUBB6Q9BUF5 446 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 CLPBQ9H078 707 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 IL36AQ9UHA7 158 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 CRLS1Q9UJA2 301 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 PRRT4C9JH25 899 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 GRID2O43424 1007 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 SNUPNO95149 360 aaKnown RBP26.29■■□□□ 1.8
LDB1-202ENST00000425280 TPBGLP0DKB5 382 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 MTHFD2P13995 350 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 HNRNPLP14866 589 aaKnown RBP eCLIP26.29■■□□□ 1.8
LDB1-202ENST00000425280 CLCN7P51798 805 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 SLC9B1Q4ZJI4 515 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 RPS27LQ71UM5 84 aaKnown RBP26.29■■□□□ 1.8
LDB1-202ENST00000425280 TREML1Q86YW5 311 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 L3HYPDHQ96EM0 354 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 CCDC106Q9BWC9 280 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 HPS4Q9NQG7 708 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 LNPEPQ9UIQ6 1025 aa26.29■■□□□ 1.8
LDB1-202ENST00000425280 TSPAN11A1L157 253 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 UBXN8O00124 270 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 HDAC3O15379 428 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 KERAO60938 352 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 ANKRD54Q6NXT1 300 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 STAG3L4Q8TBR4 150 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 INPP5DQ92835 1189 aa26.28■■□□□ 1.8
LDB1-202ENST00000425280 SARS2Q9NP81 518 aaKnown RBP26.28■■□□□ 1.8
LDB1-202ENST00000425280 THG1LQ9NWX6 298 aaKnown RBP26.28■■□□□ 1.8
LDB1-202ENST00000425280 KIF26AQ9ULI4 1882 aaPredicted RBP26.28■■□□□ 1.8
LDB1-202ENST00000425280 AGAP14A8MT82 685 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 ST8SIA6P61647 398 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 PDGFRLQ15198 375 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 ZNF678Q5SXM1 525 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 SEL1L3Q68CR1 1132 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 UGT3A1Q6NUS8 523 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 FRMD7Q6ZUT3 714 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 NXPE1Q8N323 547 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 KDM1BQ8NB78 822 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 NAT14Q8WUY8 206 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 EEF1AKMT1Q8WVE0 214 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 GSTO2Q9H4Y5 243 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 DEC1Q9P2X7 70 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 CDH7Q9ULB5 785 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 PRSS21Q9Y6M0 314 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 GOLGA8CPA6NN73 597 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 CDC7O00311 574 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 RASSF9O75901 435 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 IL2P60568 153 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 UBAP2LQ14157 1087 aaKnown RBP26.27■■□□□ 1.8
LDB1-202ENST00000425280 TSNQ15631 228 aaKnown RBP26.27■■□□□ 1.8
LDB1-202ENST00000425280 FBXW10Q5XX13 1052 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 PTRHD1Q6GMV3 140 aaKnown RBP26.27■■□□□ 1.8
LDB1-202ENST00000425280 VITQ6UXI7 678 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 CPNE9Q8IYJ1 553 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 LINGO1Q96FE5 620 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 OSBPL1AQ9BXW6 950 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 VTI1BQ9UEU0 232 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 GNPTGQ9UJJ9 305 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 DHRS7Q9Y394 339 aa26.27■■□□□ 1.8
LDB1-202ENST00000425280 NPEPPSL1A6NEC2 478 aa26.26■■□□□ 1.79
LDB1-202ENST00000425280 SLCO1B7G3V0H7 640 aa26.26■■□□□ 1.79
LDB1-202ENST00000425280 HNRNPCL1O60812 293 aaKnown RBP26.26■■□□□ 1.79
LDB1-202ENST00000425280 TIMP2P16035 220 aa26.26■■□□□ 1.79
LDB1-202ENST00000425280 RASSF2P50749 326 aa26.26■■□□□ 1.79
LDB1-202ENST00000425280 HERVK_113P63132 956 aa26.26■■□□□ 1.79
LDB1-202ENST00000425280 KDSRQ06136 332 aa26.26■■□□□ 1.79
LDB1-202ENST00000425280 PTGR2Q8N8N7 351 aaPredicted RBP26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms