RNA–Protein interactions for RNA: ENST00000418600.6

SYNGAP1-202, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 5,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-202ENST00000418600 LILRB3O75022 631 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 ITGB1P05556 798 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 ZNF30P17039 623 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 EIF4HQ15056 248 aaKnown RBP16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 CCNYL2Q5T2Q4 361 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 KCNV2Q8TDN2 545 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 CERS2Q96G23 380 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 VSTM5A8MXK1 200 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 CRYMQ14894 314 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 SGCBQ16585 318 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 CHST7Q9NS84 486 aa16.83■□□□□ 0.29
SYNGAP1-202ENST00000418600 ANGPT1Q15389 498 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 TMEM156Q8N614 296 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 AZIN2Q96A70 460 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 MTF2Q9Y483 593 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 CAPN6Q9Y6Q1 641 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 CHD4Q14839 1912 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 CCDC154A6NI56 674 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 PRKCIP41743 596 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 CCNHP51946 323 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 PGDP52209 483 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 ST3GAL1Q11201 340 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 CRYBG2Q8N1P7 616 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 CDYL2Q8N8U2 506 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 VN1R2Q8NFZ6 395 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 RAD51AP1Q96B01 352 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 HIC2Q96JB3 615 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 SLC2A11Q9BYW1 496 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 TMEM120BA0PK00 339 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 PXNP49023 591 aaPredicted RBP16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 PSMD4P55036 377 aaKnown RBP16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 VAC14Q08AM6 782 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 ATP6V1C2Q8NEY4 427 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 ADPRHL2Q9NX46 363 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 ANAPC2Q9UJX6 822 aa16.83■□□□□ 0.28
SYNGAP1-202ENST00000418600 LIASO43766 372 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 LRPAP1P30533 357 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 DEPDC7Q96QD5 511 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 SIK3Q9Y2K2 1263 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 C2orf78A6NCI8 922 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 E9PBE3 544 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 PFKLP17858 780 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 TCEA1P23193 301 aaKnown RBP16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 ME2P23368 584 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 PSMA4P25789 261 aaKnown RBP16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 MDH1P40925 334 aaKnown RBP16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 VSNL1P62760 191 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 LMAN2Q12907 356 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 SNX30Q5VWJ9 437 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 UNC5AQ6ZN44 842 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 FGD2Q7Z6J4 655 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 KIAA2013Q8IYS2 634 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 OR2W6PQ8NHA6 318 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 VPS4AQ9UN37 437 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 LINC01553A4QN01 128 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 ULK1O75385 1050 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 ALBP02768 609 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 PECAM1P16284 738 aaPredicted RBP16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 C5AR1P21730 350 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 GUCY1A3Q02108 690 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 PYROXD2Q8N2H3 581 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 MSANTD3Q96H12 275 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 GRIN2DO15399 1336 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 SNAP91O60641 907 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 MT-CO1P00395 513 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 ABCG1P45844 678 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 TRPC4APQ8TEL6 797 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 TPD52L3Q96J77 140 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 CCM2Q9BSQ5 444 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 FGFBP2Q9BYJ0 223 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 TMEM98Q9Y2Y6 226 aa16.82■□□□□ 0.28
SYNGAP1-202ENST00000418600 C2orf71A6NGG8 1288 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 A8MUI8 341 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 KRT75O95678 551 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 NR2F1P10589 423 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 PKMP14618 531 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 VAV1P15498 845 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 RABIFP47224 123 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 GRIA4P48058 902 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 CCZ1BP86790 482 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 CCZ1P86791 482 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 TBL3Q12788 808 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 C5orf34Q96MH7 638 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 APOBEC3GQ9HC16 384 aaKnown RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 HEBP1Q9NRV9 189 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 TMEM191CA6NGB0 347 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 PIRO00625 290 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 KDELR3O43731 214 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 CD72P21854 359 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 ZNF132P52740 706 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 MSLNQ13421 630 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 NAE1Q13564 534 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 PRRT3Q5FWE3 981 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 RALGPS2Q86X27 583 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 PHF7Q9BWX1 381 aaPredicted RBP16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 TBC1D23Q9NUY8 699 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 NUMBLQ9Y6R0 609 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 NCANO14594 1321 aa16.81■□□□□ 0.28
SYNGAP1-202ENST00000418600 WNT7AO00755 349 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms