RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 AMACRQ9UHK6 382 aa15.22■□□□□ 0.03
DDX56-202ENST00000415758 RPL26L1Q9UNX3 145 aaKnown RBP15.22■□□□□ 0.03
DDX56-202ENST00000415758 POLHQ9Y253 713 aa15.22■□□□□ 0.03
DDX56-202ENST00000415758 KCNK6Q9Y257 313 aa15.22■□□□□ 0.03
DDX56-202ENST00000415758 PCDHGA6Q9Y5G7 932 aa15.22■□□□□ 0.03
DDX56-202ENST00000415758 RGSL1A5PLK6 1076 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 NUAK1O60285 661 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 CLDN7O95471 211 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 FURINP09958 794 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 ACP5P13686 325 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 TCF4P15884 667 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 ZNF28P17035 718 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 SPINT3P49223 89 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 MLLT10P55197 1068 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 MYL5Q02045 173 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 HSPH1Q92598 858 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 FATE1Q969F0 183 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 PLEKHG4BQ96PX9 1271 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 CARD9Q9H257 536 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 HSD3B7Q9H2F3 369 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 FAM83DQ9H4H8 585 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 HAUS4Q9H6D7 363 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 PCDH18Q9HCL0 1135 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 PRDM8Q9NQV8 689 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 AIPL1Q9NZN9 384 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 OGFRQ9NZT2 677 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 CHMP5Q9NZZ3 219 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 KCND3Q9UK17 655 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 CROTQ9UKG9 612 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 CHKBQ9Y259 395 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 ADGRG1Q9Y653 693 aa15.21■□□□□ 0.03
DDX56-202ENST00000415758 RP1L1Q8IWN7 2480 aaPredicted RBP15.21■□□□□ 0.02
DDX56-202ENST00000415758 ZNF106Q9H2Y7 1883 aaKnown RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 FADS2P1A8MWK0 482 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 GRID2O43424 1007 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 SNX2O60749 519 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 MYBL1P10243 752 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 NR1D1P20393 614 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 CDK11BP21127 795 aaKnown RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 IL4RP24394 825 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 PRKCIP41743 596 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 MAPK9P45984 424 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 GFERP55789 205 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 FOXM1Q08050 763 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 ITKQ08881 620 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 ERV3-1Q14264 604 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 PIGHQ14442 188 aaPredicted RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 ASB18Q6ZVZ8 466 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 ZNF571Q7Z3V5 609 aaPredicted RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 APLFQ8IW19 511 aaPredicted RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 ARRDC2Q8TBH0 407 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 FAM71BQ8TC56 605 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 ZNF653Q96CK0 615 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 TRIM11Q96F44 468 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 ISCUQ9H1K1 167 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 ZNF768Q9H5H4 540 aaKnown RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 RCOR3Q9P2K3 495 aaPredicted RBP15.2■□□□□ 0.02
DDX56-202ENST00000415758 UNC79Q9P2D8 2635 aa15.2■□□□□ 0.02
DDX56-202ENST00000415758 LRRC53A6NM62 1247 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 GPR89AB7ZAQ6 455 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 DDX3XO00571 662 aaKnown RBP eCLIP15.19■□□□□ 0.021e-7■■■■□ 23.6
DDX56-202ENST00000415758 MATN3O15232 486 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 RFPL1O75677 317 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 KRT7P08729 469 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 GPR89BP0CG08 455 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 FGF5P12034 268 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 CA4P22748 312 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 GARSP41250 739 aaKnown RBP15.19■□□□□ 0.02
DDX56-202ENST00000415758 ZNF165P49910 485 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 PMS2P54278 862 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 DSC2Q02487 901 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 GALNT2Q10471 571 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 TXNRD3NBQ6F5E7 133 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 TIGD7Q6NT04 549 aaPredicted RBP15.19■□□□□ 0.02
DDX56-202ENST00000415758 TMEM26Q6ZUK4 368 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 PHYKPLQ8IUZ5 450 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 NIPA2Q8N8Q9 360 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 GALNT6Q8NCL4 622 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 TSGA13Q96PP4 275 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 PCDH9Q9HC56 1237 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 HAUS2Q9NVX0 235 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 ATXN10Q9UBB4 475 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 TLK1Q9UKI8 766 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 SLC30A1Q9Y6M5 507 aa15.19■□□□□ 0.02
DDX56-202ENST00000415758 C1orf232A0A0U1RR37 186 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 ANKRD66B4E2M5 251 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 CHUKO15111 745 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 CREG1O75629 220 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 KIAA0754O94854 1291 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 UBXN7O94888 489 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 NDUFA10O95299 355 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 ZNF8P17098 575 aaPredicted RBP15.18■□□□□ 0.02
DDX56-202ENST00000415758 CCNCP24863 283 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 SH3BP2P78314 561 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 SLC25A11Q02978 314 aaKnown RBP15.18■□□□□ 0.02
DDX56-202ENST00000415758 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.18■□□□□ 0.02
DDX56-202ENST00000415758 ANKRD20A8PQ5CZ79 823 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 GALNT11Q8NCW6 608 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 CCHCR1Q8TD31 782 aa15.18■□□□□ 0.02
DDX56-202ENST00000415758 KLHL6Q8WZ60 621 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms