RNA–Protein interactions for RNA: ENST00000415691.2

HNF4A-204, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 2,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-204ENST00000415691 SNX13Q9Y5W8 968 aa13.2□□□□□ -0.3
HNF4A-204ENST00000415691 KCNN4O15554 427 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 IRAK2O43187 625 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 BCL10O95999 233 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 MLNP12872 115 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 JUNBP17275 347 aaPredicted RBP13.19□□□□□ -0.3
HNF4A-204ENST00000415691 HDCP19113 662 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TGM2P21980 687 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 KCNQ1P51787 676 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 PRKAA2P54646 552 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 SEL1L3Q68CR1 1132 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 HMBOX1Q6NT76 420 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TMEM214Q6NUQ4 689 aaKnown RBP13.19□□□□□ -0.3
HNF4A-204ENST00000415691 PYROXD2Q8N2H3 581 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 OR13F1Q8NGS4 319 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 MRPS31Q92665 395 aaKnown RBP13.19□□□□□ -0.3
HNF4A-204ENST00000415691 RNF34Q969K3 372 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 FEM1CQ96JP0 617 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 ZSWIM3Q96MP5 696 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 ALPK1Q96QP1 1244 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 CIB1Q99828 191 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 SMPD4Q9NXE4 827 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 MID2Q9UJV3 735 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 DNMT3LQ9UJW3 386 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 SNX10Q9Y5X0 201 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TCAF2A6NFQ2 919 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 ZNF839A8K0R7 811 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TRIM24O15164 1050 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TRIM13O60858 407 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 CXCR3P49682 368 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 CCT8P50990 548 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 PRKCQQ04759 706 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 ZNF846Q147U1 533 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 PDK2Q15119 407 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 SLC36A3Q495N2 470 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 GPR158Q5T848 1215 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 ERMP1Q7Z2K6 904 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 GPR149Q86SP6 731 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TTC30BQ8N4P2 665 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 RNF148Q8N7C7 305 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TTC16Q8NEE8 873 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 RAB2BQ8WUD1 216 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 ADI1Q9BV57 179 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 CALN1Q9BXU9 219 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 TKTL2Q9H0I9 626 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 S1PR5Q9H228 398 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 WDCPQ9H6R7 721 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 POLR1BQ9H9Y6 1135 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 OLA1Q9NTK5 396 aaKnown RBP13.19□□□□□ -0.3
HNF4A-204ENST00000415691 DAPK2Q9UIK4 370 aa13.19□□□□□ -0.3
HNF4A-204ENST00000415691 CNOT6Q9ULM6 557 aaKnown RBP13.19□□□□□ -0.3
HNF4A-204ENST00000415691 STX16-NPEPL1H3BU86 382 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 DLGAP1O14490 977 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 PAPLNO95428 1278 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 F9P00740 461 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 CD1EP15812 388 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 CEBPBP17676 345 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 MAP4P27816 1152 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 GARSP41250 739 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 TBX4P57082 545 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 PSME3P61289 254 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 CD300CQ08708 224 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 MERTKQ12866 999 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 ABRAXAS1Q6UWZ7 409 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 NPNTQ6UXI9 565 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 CADM3Q8N126 398 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 ATP6V0D2Q8N8Y2 350 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 ST13P5Q8NFI4 369 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 GUCD1Q96NT3 240 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 SNRNP25Q9BV90 132 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 NANOGQ9H9S0 305 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 SMOXQ9NWM0 555 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 ANKMY1Q9P2S6 941 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 MRPS23Q9Y3D9 190 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 TCAF1Q9Y4C2 921 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 PCDHGA7Q9Y5G6 932 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 NOX1Q9Y5S8 564 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 NOTCH4Q99466 2003 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 G3V2L1 256 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 SCAMP3O14828 347 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 POU2F2P09086 479 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 IRF1P10914 325 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 MBL2P11226 248 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 POLR2EP19388 210 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 ADRA1BP35368 520 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 RPL14P50914 215 aaKnown RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 PRAMEP78395 509 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 NSUN2Q08J23 767 aaKnown RBP eCLIP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 TRAF2Q12933 501 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 GALNT18Q6P9A2 607 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 MPP5Q8N3R9 675 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 GOLM1Q8NBJ4 401 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 SLC39A13Q96H72 371 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 FCRL2Q96LA5 508 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 SERPINB11Q96P15 392 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 RNF157Q96PX1 679 aa13.18□□□□□ -0.3
HNF4A-204ENST00000415691 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
HNF4A-204ENST00000415691 WDR12Q9GZL7 423 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms