RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MAXP61244 160 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 CLCQ05315 142 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 OR4D1Q15615 310 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PFKFB4Q16877 469 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 GEN1Q17RS7 908 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 PLA2G4EQ3MJ16 856 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 ZNF354CQ86Y25 554 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 DDIASQ8IXT1 998 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 DHRSXQ8N5I4 330 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 NAT16Q8N8M0 369 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 ATP6V0D2Q8N8Y2 350 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 EXT2Q93063 718 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TBATAQ96M53 351 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TMEM209Q96SK2 561 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TUBA1CQ9BQE3 449 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 NMUR1Q9HB89 426 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 LTB4R2Q9NPC1 389 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 ZNF639Q9UID6 485 aa9.74□□□□□ -0.85
CD44-206ENST00000415148 TCRBV5S2A0A599 114 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 DRGXA6NNA5 263 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 SYCE1LA8MT33 242 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 H0YAE9 185 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 UBXN8O00124 270 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 STX16O14662 325 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 EI24O14681 340 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 SIX3O95343 332 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 GOT2P00505 430 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 HAPLN1P10915 354 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 MATN1P21941 496 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 DCKP27707 260 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 HTR1EP28566 365 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 RFC2P35250 354 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 CAPGP40121 348 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 PGFP49763 221 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TBX4P57082 545 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 YBEYP58557 167 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 BEX3Q00994 111 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TUSC3Q13454 348 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 RCAN2Q14206 197 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 IHHQ14623 411 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 NEDD8Q15843 81 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 FXNQ16595 210 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TYSND1Q2T9J0 566 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 PARP15Q460N3 678 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 MS4A13Q5J8X5 152 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 ANKS6Q68DC2 871 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TXNDC11Q6PKC3 985 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 ZBTB8BQ8NAP8 495 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 OR4L1Q8NH43 312 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 NSUN5Q96P11 429 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 BRINP2Q9C0B6 783 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 FBXO44Q9H4M3 255 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 ALG2Q9H553 416 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 POLR1BQ9H9Y6 1135 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 CATSPERZQ9NTU4 200 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 AIG1Q9NVV5 245 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 SMPD3Q9NY59 655 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.73□□□□□ -0.85
CD44-206ENST00000415148 EVLQ9UI08 416 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 SH3GLB1Q9Y371 365 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 BRCA2P51587 3418 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TTC3P53804 2025 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 LCHNA4D1U4 455 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TMEM221A6NGB7 291 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 OR51F1A6NGY5 319 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TRIM64BA6NI03 449 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 H0Y858 1186 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 CLOCKO15516 846 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 KLK8O60259 260 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 COQ9O75208 318 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 ZBTB11O95625 1053 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 SNAP29O95721 258 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 CYBBP04839 570 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 LINC00032P0C843 101 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 UROSP10746 265 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 ZNF182P17025 639 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 UGT1A1P22309 533 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 UGT1A4P22310 534 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 UGT1A3P35503 534 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 UGT1A5P35504 534 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 RXRGP48443 463 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 CD97P48960 835 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 STC1P52823 247 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 NFYCQ13952 458 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 CYP51A1Q16850 503 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 PDCD4Q53EL6 469 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 RABL3Q5HYI8 236 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 KCTD8Q6ZWB6 473 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 IFNEQ86WN2 208 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 ZC3H7AQ8IWR0 971 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 PGBD5Q8N414 524 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 RYBPQ8N488 228 aaPredicted RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 FBXO39Q8N4B4 442 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 NUDT8Q8WV74 236 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 PSMG2Q969U7 264 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 PABPC5Q96DU9 382 aaKnown RBP9.73□□□□□ -0.85
CD44-206ENST00000415148 BTN2A3PQ96KV6 586 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 TEX37Q96LM6 180 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 KLHL5Q96PQ7 755 aa9.73□□□□□ -0.85
CD44-206ENST00000415148 KCTD14Q9BQ13 255 aaPredicted RBP9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms